RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 TRAV5A0A0B4J249 113 aa17.19■□□□□ 0.34
LTBP3-201ENST00000301873 ZNF414Q96IQ9 312 aa17.19■□□□□ 0.34
LTBP3-201ENST00000301873 RRN3P1Q2M238 152 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 MDS2Q8NDY4 140 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 KIR2DL4Q99706 377 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 SNRPD3P62318 126 aaKnown RBP17.18■□□□□ 0.34
LTBP3-201ENST00000301873 LINC00527Q9UJ94 153 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 C20orf204Q6ZNR8 217 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 Q6ZRM9 215 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 TNCP24821 2201 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 TIMP3P35625 211 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 RNF125Q96EQ8 232 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 SLC25A15Q9Y619 301 aa17.18■□□□□ 0.34
LTBP3-201ENST00000301873 A0A0G2JRQ6 117 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 A0A1W2PRE2 83 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 FABP2P12104 132 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 C1QL4Q86Z23 238 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 PMCHL2Q9BQD1 86 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 COLCA2A8K830 154 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 PET117Q6UWS5 81 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 EPDR1Q9UM22 224 aa17.17■□□□□ 0.34
LTBP3-201ENST00000301873 TCRBV4S1A1TA0A5B7 111 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 MYOD1P15172 320 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 TEX38Q6PEX7 206 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 HEPN1Q6WQI6 88 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 VKORC1Q9BQB6 163 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 REG4Q9BYZ8 158 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 PIEZO1Q92508 2521 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 LINC00473A8K010 186 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 DNLZQ5SXM8 178 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 CXCL1P09341 107 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 TSPOP30536 169 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 COQ2Q96H96 371 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 RAX2Q96IS3 184 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 DUX5Q96PT3 197 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 NRN1Q9NPD7 142 aa17.16■□□□□ 0.34
LTBP3-201ENST00000301873 MLNRO43193 412 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 CEACAM4O75871 244 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 COTL1Q14019 142 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 ZNF672Q499Z4 452 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-201ENST00000301873 CIARTQ8N365 385 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-201ENST00000301873 SEPSECSQ9HD40 501 aaKnown RBP17.15■□□□□ 0.34
LTBP3-201ENST00000301873 IGKV3OR2-268A0A0C4DH90 116 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 TMEM238LA0A1B0GVL6 79 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 A6NJY4 79 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 AREGP15514 252 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 SPATA31B1PQ5VZV4 182 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 PRDM13Q9H4Q3 707 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 THSD7BQ9C0I4 1608 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 C19orf54Q5BKX5 351 aa17.15■□□□□ 0.34
LTBP3-201ENST00000301873 IZUMO1RA6ND01 250 aa17.14■□□□□ 0.34
LTBP3-201ENST00000301873 SMAD7O15105 426 aaKnown RBP17.14■□□□□ 0.34
LTBP3-201ENST00000301873 SRSF7Q16629 238 aaKnown RBP eCLIP17.14■□□□□ 0.34
LTBP3-201ENST00000301873 TMEM170AQ8WVE7 144 aa17.14■□□□□ 0.34
LTBP3-201ENST00000301873 OR11H12B2RN74 326 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 GFI1BQ5VTD9 330 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 OR11H1Q8NG94 326 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 OR11H2Q8NH07 326 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 DERL1Q9BUN8 251 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 A0A0G2JLM5 398 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 PPIFP30405 207 aaKnown RBP17.14■□□□□ 0.33
LTBP3-201ENST00000301873 Q6P435 159 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 TMEM14EPQ6UXP3 125 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 STAG3L2P0CL84 134 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 STAG3L3P0CL85 134 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 ADMP35318 185 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 FER1L6-AS1Q8NA97 138 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 SMIM12Q96EX1 92 aa17.14■□□□□ 0.33
LTBP3-201ENST00000301873 DYSFO75923 2080 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
LTBP3-201ENST00000301873 GLRX5Q86SX6 157 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 FMC1Q96HJ9 113 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 GLMPQ8WWB7 406 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 CCDC168Q8NDH2 2452 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 RHOGP84095 191 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 VOPP1Q96AW1 172 aa17.13■□□□□ 0.33
LTBP3-201ENST00000301873 PLP1P60201 277 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 PRSS8Q16651 343 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 TMEM170BQ5T4T1 132 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 OSTCQ9NRP0 149 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 KLF17Q5JT82 389 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-201ENST00000301873 TMEM200BQ69YZ2 307 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 ZNF600Q6ZNG1 722 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 PARD6GQ9BYG4 376 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-201ENST00000301873 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 TSC2P49815 1807 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 OTOGLQ3ZCN5 2332 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 ORMDL3Q8N138 153 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 AGMATQ9BSE5 352 aa17.12■□□□□ 0.33
LTBP3-201ENST00000301873 LY6HO94772 140 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 PRR31Q5SQ13 230 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 PRR14LQ5THK1 2151 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 PSMB11A5LHX3 300 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 FABP5P3A8MUU1 101 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 FAM71F2Q6NXP2 309 aa17.11■□□□□ 0.33
LTBP3-201ENST00000301873 OTORQ9NRC9 128 aa17.1■□□□□ 0.33
LTBP3-201ENST00000301873 PSG8Q9UQ74 426 aa17.1■□□□□ 0.33
LTBP3-201ENST00000301873 THBDP07204 575 aa17.1■□□□□ 0.33
LTBP3-201ENST00000301873 ZNF474Q6S9Z5 364 aaPredicted RBP17.1■□□□□ 0.33
LTBP3-201ENST00000301873 TRBV24-1A0A075B6N3 115 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms