RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 A8MWL6 223 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 C21orf140B9A014 251 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 GPR12P47775 334 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 OR13A1Q8NGR1 328 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 OR2V2Q96R30 315 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 TCF19Q9Y242 345 aa11.77□□□□□ -0.52
CDT1-201ENST00000301019 RPS20P60866 119 aaKnown RBP11.77□□□□□ -0.53
CDT1-201ENST00000301019 SLC35E4Q6ICL7 350 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 Q6ZSR3 168 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 MPC1Q9Y5U8 109 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 ENY2Q9NPA8 101 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 RELNP78509 3460 aa11.77□□□□□ -0.53
CDT1-201ENST00000301019 SVEP1Q4LDE5 3571 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 A1L4Q6 167 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 NKX2-8O15522 239 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 NXPH1P58417 271 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
CDT1-201ENST00000301019 TUSC5Q8IXB3 177 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
CDT1-201ENST00000301019 POM121L2Q96KW2 1035 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 EXPH5Q8NEV8 1989 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 CYC1P08574 325 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 FXYD2P54710 66 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 PCBD1P61457 104 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 ERVK-16P61578 105 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 C11orf52Q96A22 123 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 ZNF391Q9UJN7 358 aa11.76□□□□□ -0.53
CDT1-201ENST00000301019 LIFP15018 202 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 HBBP68871 147 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 AGRNO00468 2067 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 GVINP1Q7Z2Y8 2422 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 PKDREJQ9NTG1 2253 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 PROP1O75360 226 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 SLC25A5P05141 298 aaKnown RBP11.75□□□□□ -0.53
CDT1-201ENST00000301019 GDF1P27539 372 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
CDT1-201ENST00000301019 H3BRM9 83 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 LAMTOR5O43504 91 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 DUX1O43812 170 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 TGFAP01135 160 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 LTAP01374 205 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 SEC11AP67812 179 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 SPAG8Q99932 426 aaPredicted RBP11.74□□□□□ -0.53
CDT1-201ENST00000301019 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 CNIH1O95406 144 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 P0C879 139 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 OR1C1Q15619 314 aa11.74□□□□□ -0.53
CDT1-201ENST00000301019 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
CDT1-201ENST00000301019 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
CDT1-201ENST00000301019 BCL6BQ8N143 479 aaPredicted RBP11.74□□□□□ -0.53
CDT1-201ENST00000301019 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 SPINT2O43291 252 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 LIPFP07098 398 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 ORM2P19652 201 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 TECTAO75443 2155 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 LAMA5O15230 3695 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 C9orf172C9J069 976 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 AP5S1Q9NUS5 200 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 INSIG2Q9Y5U4 225 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 TNFSF15O95150 251 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 RAC3P60763 192 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 FADS6Q8N9I5 356 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 TAAR6Q96RI8 345 aa11.73□□□□□ -0.53
CDT1-201ENST00000301019 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
CDT1-201ENST00000301019 MPDU1O75352 247 aa11.72□□□□□ -0.53
CDT1-201ENST00000301019 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
CDT1-201ENST00000301019 C1orf210Q8IVY1 113 aa11.72□□□□□ -0.53
CDT1-201ENST00000301019 DAZAP1Q96EP5 407 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms