RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 J3QW42 95 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 CD69Q07108 199 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 RPP21Q9H633 154 aaKnown RBP10.57□□□□□ -0.72
TVP23A-201ENST00000299866 C1RLQ9NZP8 487 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 H3BUT2 72 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 MGST3O14880 152 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 MOSP00540 346 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 RNASE2P10153 161 aaKnown RBP10.56□□□□□ -0.72
TVP23A-201ENST00000299866 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 TMEM97Q5BJF2 176 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 PET117Q6UWS5 81 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 PCNX2A6NKB5 2137 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 PATE3B3GLJ2 98 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 UPK2O00526 184 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 P01737 135 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 REG1BP48304 166 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 MEOX1P50221 254 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 FAM201AQ5SY85 155 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 H1FXQ92522 213 aaKnown RBP10.56□□□□□ -0.72
TVP23A-201ENST00000299866 RND1Q92730 232 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 TMEM265A0A087WTH1 108 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 C6orf15Q6UXA7 325 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-201ENST00000299866 TMEM116Q8NCL8 245 aa10.56□□□□□ -0.72
TVP23A-201ENST00000299866 DAZAP1Q96EP5 407 aaKnown RBP10.56□□□□□ -0.72
TVP23A-201ENST00000299866 DYSFO75923 2080 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 A8MWL6 223 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 K7ESF4 209 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 KLK10O43240 276 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 C7orf69Q9H7B7 122 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 MED13Q9UHV7 2174 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 NTN3O00634 580 aaPredicted RBP10.55□□□□□ -0.72
TVP23A-201ENST00000299866 GOSR1O95249 250 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PRB4P10163 310 aaPredicted RBP10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PAX2Q02962 417 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 GTF2H5Q6ZYL4 71 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 BHLHA15Q7RTS1 189 aaPredicted RBP10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 JMJD8Q96S16 334 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
TVP23A-201ENST00000299866 PSMB11A5LHX3 300 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 F2RL2O00254 374 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 COX8AP10176 69 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 ORM2P19652 201 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 NCR2O95944 276 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 RBMXL3Q8N7X1 1067 aaKnown RBP10.54□□□□□ -0.72
TVP23A-201ENST00000299866 CNEP1R1Q8N9A8 125 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 GPR82Q96P67 336 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 HEATR1Q9H583 2144 aaKnown RBP10.54□□□□□ -0.72
TVP23A-201ENST00000299866 PCSK5Q92824 1860 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 SP9P0CG40 484 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 LINC00305Q7Z4B0 112 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 CADP27708 2225 aa10.54□□□□□ -0.72
TVP23A-201ENST00000299866 HOXC12P31275 282 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 SPRNQ5BIV9 151 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 C1orf185Q5T7R7 199 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
TVP23A-201ENST00000299866 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 ABCA1O95477 2261 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
TVP23A-201ENST00000299866 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
TVP23A-201ENST00000299866 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 ZNF257Q9Y2Q1 563 aa10.53□□□□□ -0.72
TVP23A-201ENST00000299866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.52□□□□□ -0.72
TVP23A-201ENST00000299866 G3V4G9 280 aa10.52□□□□□ -0.72
TVP23A-201ENST00000299866 VWA1Q6PCB0 445 aa10.52□□□□□ -0.72
TVP23A-201ENST00000299866 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.72
TVP23A-201ENST00000299866 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.72
TVP23A-201ENST00000299866 OR1N2Q8NGR9 330 aa10.52□□□□□ -0.72
TVP23A-201ENST00000299866 SPRR3Q9UBC9 169 aa10.52□□□□□ -0.72
TVP23A-201ENST00000299866 CIDEAO60543 219 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 SEC11AP67812 179 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 GUSBP1Q15486 140 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 DEFB108BQ8NET1 73 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 OR1L4Q8NGR5 311 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 E7EUB6 86 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 INO80CQ6PI98 192 aaPredicted RBP10.52□□□□□ -0.73
TVP23A-201ENST00000299866 MOGAT3Q86VF5 341 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 GCSAMQ8N6F7 178 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 OR1L8Q8NGR8 309 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
TVP23A-201ENST00000299866 C9orf118A6NHY6 69 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 DLL1O00548 723 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ERHP84090 104 aaKnown RBP10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms