RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CD69Q07108 199 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 SLC38A11Q08AI6 406 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 OR2F1Q13607 317 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 PVRIGQ6DKI7 326 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 TEX38Q6PEX7 206 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM65Q6PI78 240 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 TCTE3Q8IZS6 198 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 THAP6Q8TBB0 222 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 SCARB1Q8WTV0 552 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 RAX2Q96IS3 184 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 RAB40CQ96S21 281 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 SRSF8Q9BRL6 282 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 LYRM2Q9NU23 88 aaPredicted RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 FBXL17Q9UF56 701 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 HSPB11Q9Y547 144 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 IGKV1D-37A0A075B6S9 117 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 IGKV1OR2-108A0A075B7D4 117 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHV3-49A0A0A0MS15 119 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 FAM223BA6NKX1 122 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 E5RGE8 158 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 H3BUA1 57 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 TSC22D2O75157 780 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 SLPIP03973 132 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 PLA2G1BP04054 148 aaKnown RBP4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 LYL1P12980 280 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 GATA2P23769 480 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 EIF2B2P49770 351 aaKnown RBP4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 RUNX1Q01196 453 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM182Q6ZP80 229 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 FAM223AQ8IWN6 122 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 C3orf56Q8N813 242 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 RNF152Q8N8N0 203 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 NECAP1Q8NC96 275 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 C4orf3Q8WVX3 66 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 CACNG8Q8WXS5 425 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 NPIPB3Q92617 1050 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 EEF1AKMT3Q96AZ1 226 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 SLC35E1Q96K37 410 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 C8orf49Q96NF6 230 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 CIB3Q96Q77 187 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 CITED1Q99966 193 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 C21orf62Q9NYP8 219 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 TNFSF18Q9UNG2 199 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 MEGF8Q7Z7M0 2845 aa4.98□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHV3OR16-13A0A075B7E8 117 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHV3-74A0A0B4J1X5 117 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 I3L521 148 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 OR2C1O95371 312 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 IGKV1-17P01599 117 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 C1QBP02746 253 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 HNRNPCP07910 306 aaKnown RBP eCLIP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 IGLC1P0CG04 106 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 SLC25A4P12235 298 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 PVALBP20472 110 aaPredicted RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 FGF7P21781 194 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 RPL12P30050 165 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 OR10J1P30954 320 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 HOXD3P31249 432 aaPredicted RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 ARL3P36405 182 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 P2RY1P47900 373 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 SULT1A1P50225 295 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 RAB11AP62491 216 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 DLK1P80370 383 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF90Q03938 601 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 GAMTQ14353 236 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF343Q6P1L6 599 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 UNQ9165/PRO28630Q6UXU0 137 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 HSD17B13Q7Z5P4 300 aaPredicted RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 LILRB2Q8N423 598 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 OR5C1Q8NGR4 320 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 MGST2Q99735 147 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF747Q9BV97 191 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM147Q9BVK8 224 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 SLA2Q9H6Q3 261 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 DOK5Q9P104 306 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 TSSC4Q9Y5U2 329 aaPredicted RBP4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 U3KQ87 197 aa4.97□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHV3-66A0A0C4DH42 116 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 A0A1B0GUS0 222 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 TGOLN2O43493 480 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 GNG7O60262 68 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 RLN2P04090 185 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 CLEC3BP05452 202 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 HIST1H1BP16401 226 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 SUB1P53999 127 aaKnown RBP eCLIP4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 SYNJ2BPP57105 145 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 TAS2R30P59541 319 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 BAXQ07812 192 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 FGL1Q08830 312 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 KLK9Q2XQG4 91 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 ZFP69Q49AA0 526 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 GCSAMLQ5JQS6 135 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 MIC13Q5XKP0 118 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 RPL7L1Q6DKI1 246 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 LAMTOR1Q6IAA8 161 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms