RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 MGST3O14880 152 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 MGST1P10620 155 aaKnown RBP12.7□□□□□ -0.38
UBAP1-201ENST00000297661 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
UBAP1-201ENST00000297661 PSG9Q00887 426 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 STPG3Q8N7X2 389 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 PRORYQ9H606 182 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 OR4C46A6NHA9 309 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 CIDEAO60543 219 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 C22orf34Q6ZV56 151 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 C1orf159Q96HA4 380 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 CLEC5AQ9NY25 188 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 IL19Q9UHD0 177 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 PKDREJQ9NTG1 2253 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
UBAP1-201ENST00000297661 RIPPLY3P57055 190 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 ZNF474Q6S9Z5 364 aaPredicted RBP12.69□□□□□ -0.38
UBAP1-201ENST00000297661 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
UBAP1-201ENST00000297661 ACTL6BO94805 426 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
UBAP1-201ENST00000297661 PSG5Q15238 335 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 ASPHD1Q5U4P2 390 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 ST20Q9HBF5 79 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 LSM4Q9Y4Z0 139 aaKnown RBP12.68□□□□□ -0.38
UBAP1-201ENST00000297661 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 SSBP3Q9BWW4 388 aaPredicted RBP12.68□□□□□ -0.38
UBAP1-201ENST00000297661 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 GATA2P23769 480 aaPredicted RBP12.68□□□□□ -0.38
UBAP1-201ENST00000297661 C17orf58Q2M2W7 97 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 MIR17HGQ75NE6 70 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 FAM168AQ92567 244 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
UBAP1-201ENST00000297661 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 SAP30O75446 220 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 GPR6P46095 362 aaPredicted RBP12.67□□□□□ -0.38
UBAP1-201ENST00000297661 SLC25A34Q6PIV7 304 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 SAP30LQ9HAJ7 183 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 HSBP1L1C9JCN9 74 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 PRB1P04280 392 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 MFAP2P55001 183 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 TRAT1Q6PIZ9 186 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 FAM216BQ8N7L0 139 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 CCL13Q99616 98 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 GCM1Q9NP62 436 aa12.67□□□□□ -0.38
UBAP1-201ENST00000297661 CORTO00230 105 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
UBAP1-201ENST00000297661 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 TACC2O95359 2948 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 AHRRA9YTQ3 701 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 TEPPQ6URK8 271 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 ZCCHC24Q8N2G6 241 aaKnown RBP12.66□□□□□ -0.38
UBAP1-201ENST00000297661 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
UBAP1-201ENST00000297661 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
UBAP1-201ENST00000297661 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
UBAP1-201ENST00000297661 F2RL2O00254 374 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 IGFBP2P18065 325 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 IGFL2Q6UWQ7 119 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 PPP1R35Q8TAP8 253 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
UBAP1-201ENST00000297661 DDB2Q92466 427 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 RND1Q92730 232 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 J3QR06 171 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 IGKV1-16P04430 117 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 MLANAQ16655 118 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 OR4S2Q8NH73 311 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
UBAP1-201ENST00000297661 TMEM167BQ9NRX6 74 aa12.65□□□□□ -0.38
UBAP1-201ENST00000297661 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 GGTLC3B5MD39 225 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 CD5LO43866 347 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 CEACAM4O75871 244 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 RBMXL3Q8N7X1 1067 aaKnown RBP12.64□□□□□ -0.39
UBAP1-201ENST00000297661 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 FAM215AQ9Y5M1 114 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 PPOXP50336 477 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
UBAP1-201ENST00000297661 RASL11AQ6T310 242 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 FAM216AQ8WUB2 273 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
UBAP1-201ENST00000297661 COMMD5Q9GZQ3 224 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
UBAP1-201ENST00000297661 ZGRF1Q86YA3 2104 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms