RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 ZNF430Q9H8G1 570 aaPredicted RBP13.59□□□□□ -0.23
CHRNE-201ENST00000293780 TPSG1Q9NRR2 321 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 C17orf100A8MU93 164 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 USF1P22415 310 aaPredicted RBP13.59□□□□□ -0.23
CHRNE-201ENST00000293780 SLAQ13239 276 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 OR10J3Q5JRS4 329 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 ZNF329Q86UD4 541 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 KCNS1Q96KK3 526 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 SGK494Q96LW2 274 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 AKAP13Q12802 2813 aa13.59□□□□□ -0.23
CHRNE-201ENST00000293780 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 DPRXA6NFQ7 191 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 DIRC3C9JPN6 131 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 IGLV2-23P01705 113 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 PCP4P48539 62 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 RPL19P84098 196 aaKnown RBP13.58□□□□□ -0.23
CHRNE-201ENST00000293780 NUP37Q8NFH4 326 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 TMEM167AQ8TBQ9 72 aa13.58□□□□□ -0.23
CHRNE-201ENST00000293780 FSTL3O95633 263 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 APCSP02743 223 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 TNFRSF1AP19438 455 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 GNG5P63218 68 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 PRR31Q5SQ13 230 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 CCL17Q92583 94 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 ZGRF1Q86YA3 2104 aa13.58□□□□□ -0.24
CHRNE-201ENST00000293780 TCRBV4S1A1TA0A5B7 111 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 MEF2CQ06413 473 aaPredicted RBP13.57□□□□□ -0.24
CHRNE-201ENST00000293780 COL5A1-AS1Q5SY13 56 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 GDF5OSQ5U4N7 250 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 PRR27Q6MZM9 219 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 A0A1W2PN81 502 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 HLA-DQA1P01909 254 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 TMEM108Q6UXF1 575 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 NUDT10Q8NFP7 164 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 FXYD5Q96DB9 178 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 NUDT11Q96G61 164 aa13.57□□□□□ -0.24
CHRNE-201ENST00000293780 ZNF331Q9NQX6 463 aaPredicted RBP13.57□□□□□ -0.24
CHRNE-201ENST00000293780 PPIAL4EA0A075B759 164 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 PPIAL4DF5H284 164 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 CORTO00230 105 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 PEX7O00628 323 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 SLC25A17O43808 307 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 PPIAL4FP0DN26 164 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 NIT1Q86X76 327 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 FAM57AQ8TBR7 257 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 TSKUQ8WUA8 353 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 RNF2Q99496 336 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 PPIAL4AQ9Y536 164 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 INS-IGF2F8WCM5 200 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 SIAH2O43255 324 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 MOSP00540 346 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 APELAP0DMC3 54 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 BSPH1Q075Z2 132 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 COX19Q49B96 90 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 LINC00305Q7Z4B0 112 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 MBD6Q96DN6 1003 aa13.56□□□□□ -0.24
CHRNE-201ENST00000293780 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
CHRNE-201ENST00000293780 A0A0G2JNJ9 132 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 TMEM178BH3BS89 294 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 ZNF324O75467 553 aaPredicted RBP13.55□□□□□ -0.24
CHRNE-201ENST00000293780 HCP5Q6MZN7 132 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 C11orf42Q8N5U0 333 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 BLNKQ8WV28 456 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 CTSZQ9UBR2 303 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 Q9UFV3 132 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 ZFP30Q9Y2G7 519 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 ABCA1O95477 2261 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 IGHV3-21A0A0B4J1V1 117 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 TCF21O43680 179 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 ORM2P19652 201 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 NTF3P20783 257 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 MFAP2P55001 183 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 DLX1P56177 255 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 PDPNQ86YL7 162 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 ST6GALNAC6Q969X2 333 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 SH3BGRL2Q9UJC5 107 aa13.55□□□□□ -0.24
CHRNE-201ENST00000293780 C22orf46C9J442 243 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 C3orf79P0CE67 100 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 GPR6P46095 362 aaPredicted RBP13.54□□□□□ -0.24
CHRNE-201ENST00000293780 PRB3Q04118 309 aaPredicted RBP13.54□□□□□ -0.24
CHRNE-201ENST00000293780 MMDQ15546 238 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 TBR1Q16650 682 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 OR4B1Q8NGF8 309 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 C16orf97H3BN30 126 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
CHRNE-201ENST00000293780 THBDP07204 575 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 BPIFB3P59826 476 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 THAP8Q8NA92 274 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms