RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KLF2Q9Y5W3 355 aaPredicted RBP9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 LDLRAD4O15165 306 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 IGHV3-48P01763 117 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 LINC00614P0C842 121 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 CCL1P22362 96 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 LDLRAD2Q5SZI1 272 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 ACP7Q6ZNF0 438 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 MIR17HGQ75NE6 70 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 MEGF9Q9H1U4 602 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 FOXI3A8MTJ6 420 aaPredicted RBP9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 NAPSAO96009 420 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 C1orf194Q5T5A4 169 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 TEX45Q8NA69 505 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 UBE2L6O14933 153 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 DLEU1O43261 78 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 TEX38Q6PEX7 206 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 WDR82Q6UXN9 313 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 PPIAL4CA0A0B4J2A2 164 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 FAM106AQ4KMX7 169 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 LURAP1LQ8IV03 231 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 CYTL1Q9NRR1 136 aa9.86□□□□□ -0.83
SYNGAP1-201ENST00000293748 PGPEP1LA6NFU8 196 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 TMEM50AO95807 157 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 CXCL1P09341 107 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 B3GALT5-AS1P59052 145 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 GCSAMLQ5JQS6 135 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 FAM159AQ6UWV7 190 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 PAQR4Q8N4S7 273 aaPredicted RBP9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 TMEM171Q8WVE6 324 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 GFI1Q99684 422 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 C2orf88Q9BSF0 95 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 LYPD3O95274 346 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 TFPI2P48307 235 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 ZNF56Q15929 161 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 LHFPL1Q86WI0 220 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 UBTD1Q9HAC8 227 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 WDR87Q6ZQQ6 2873 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 H7C1H1 209 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 Q6ZT83 130 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 ZNRF1Q8ND25 227 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 WFDC1Q9HC57 220 aa9.85□□□□□ -0.83
SYNGAP1-201ENST00000293748 IGKV1D-13A0A0B4J2D9 117 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 IGKV1-13P0DP09 117 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 GLRXP35754 106 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 FOXL1Q12952 345 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 TIMM23BQ5SRD1 257 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 SIGMAR1Q99720 223 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 TNRC6AQ8NDV7 1962 aaKnown RBP9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 IGKV1-9A0A0C4DH69 117 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 APOMO95445 188 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 EEF1AKMT3Q96AZ1 226 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 DMRTA2Q96SC8 542 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 A0A0G2JNJ9 132 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 PRR32B1ATL7 298 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 HBDP02042 147 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 CEACAM8P31997 349 aaPredicted RBP9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 PYY3Q5JQD4 70 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 FAM90A1Q86YD7 464 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 OR13A1Q8NGR1 328 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 Q9UFV3 132 aa9.84□□□□□ -0.83
SYNGAP1-201ENST00000293748 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 GFI1BQ5VTD9 330 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 LPAR2Q9HBW0 351 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 OTORQ9NRC9 128 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 PPBPP02775 128 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 TYMSP04818 313 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 ATP5G2Q06055 141 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 PLPPR1Q8TBJ4 325 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 NDUFS8O00217 210 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 ETV2O00321 342 aaPredicted RBP9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 ASIPP42127 132 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 HSD52Q0P140 79 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 ATP5L2Q7Z4Y8 100 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 Q9H3A6 140 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 KBTBD11-OT1A0A1B0GTJ5 212 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 GGNQ86UU5 652 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 NUDT11Q96G61 164 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 RAX2Q96IS3 184 aa9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 FNDC4Q9H6D8 234 aaPredicted RBP9.83□□□□□ -0.84
SYNGAP1-201ENST00000293748 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 IGKV3-15P01624 115 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms