RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 U3KQE9 123 aa18.42■□□□□ 0.54
U2AF1-201ENST00000291552 ANKRD20A5PA0PJZ0 165 aa18.41■□□□□ 0.54
U2AF1-201ENST00000291552 NXPH3O95157 252 aa18.41■□□□□ 0.54
U2AF1-201ENST00000291552 RND2P52198 227 aa18.41■□□□□ 0.54
U2AF1-201ENST00000291552 NANOS2P60321 138 aaKnown RBP18.41■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM187Q14656 261 aa18.41■□□□□ 0.54
U2AF1-201ENST00000291552 SLC24A4Q8NFF2 622 aa18.41■□□□□ 0.54
U2AF1-201ENST00000291552 RPS10-NUDT3A0A1W2PQS6 291 aa18.4■□□□□ 0.54
U2AF1-201ENST00000291552 A0A1W2PS18 150 aa18.4■□□□□ 0.54
U2AF1-201ENST00000291552 GSTZ1O43708 216 aaPredicted RBP18.4■□□□□ 0.54
U2AF1-201ENST00000291552 TRPT1Q86TN4 253 aaKnown RBP18.4■□□□□ 0.54
U2AF1-201ENST00000291552 DCANP1Q8TF63 244 aa18.4■□□□□ 0.54
U2AF1-201ENST00000291552 RAB2BQ8WUD1 216 aa18.4■□□□□ 0.54
U2AF1-201ENST00000291552 PRRT1Q99946 306 aa18.4■□□□□ 0.54
U2AF1-201ENST00000291552 TRAV30A0A087WSZ9 112 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 CEBPZOSA8MTT3 80 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 DEFB4AO15263 64 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 ZNF688P0C7X2 276 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 OR1S2Q8NGQ3 325 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 RNASEH2CQ8TDP1 164 aaKnown RBP18.39■□□□□ 0.53
U2AF1-201ENST00000291552 GRAMD2BQ96HH9 432 aa18.39■□□□□ 0.53
U2AF1-201ENST00000291552 C4BPBP20851 252 aa18.38■□□□□ 0.53
U2AF1-201ENST00000291552 OR10J1P30954 320 aa18.38■□□□□ 0.53
U2AF1-201ENST00000291552 GLMPQ8WWB7 406 aa18.38■□□□□ 0.53
U2AF1-201ENST00000291552 SOSTQ9BQB4 213 aa18.38■□□□□ 0.53
U2AF1-201ENST00000291552 SLIRPQ9GZT3 109 aaKnown RBP18.38■□□□□ 0.53
U2AF1-201ENST00000291552 KNCNA6PVL3 124 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 SCGB2A1O75556 95 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 SLC25A4P12235 298 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 NPY1RP25929 384 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 TMBIM6P55061 237 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 YPEL3P61236 119 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-201ENST00000291552 USF2Q15853 346 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-201ENST00000291552 NMSQ5H8A3 153 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 STHQ8IWL8 128 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 Q8NAQ8 132 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 IL22RA2Q969J5 263 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 RABL2AQ9UBK7 228 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-201ENST00000291552 RABL2BQ9UNT1 228 aa18.37■□□□□ 0.53
U2AF1-201ENST00000291552 SULT1A3P0DMM9 295 aa18.36■□□□□ 0.53
U2AF1-201ENST00000291552 SULT1A4P0DMN0 295 aa18.36■□□□□ 0.53
U2AF1-201ENST00000291552 SUPT4H1P63272 117 aaKnown RBP18.36■□□□□ 0.53
U2AF1-201ENST00000291552 C16orf54Q6UWD8 224 aa18.36■□□□□ 0.53
U2AF1-201ENST00000291552 RPP25LQ8N5L8 163 aaKnown RBP18.36■□□□□ 0.53
U2AF1-201ENST00000291552 C11orf45Q8TAV5 145 aa18.36■□□□□ 0.53
U2AF1-201ENST00000291552 BCL7BQ9BQE9 202 aa18.36■□□□□ 0.53
U2AF1-201ENST00000291552 HNRNPCP07910 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
U2AF1-201ENST00000291552 NPIPB3Q92617 1050 aa18.35■□□□□ 0.53
U2AF1-201ENST00000291552 FBXL17Q9UF56 701 aa18.35■□□□□ 0.53
U2AF1-201ENST00000291552 LYZL2Q7Z4W2 148 aa18.34■□□□□ 0.53
U2AF1-201ENST00000291552 Q8WTZ3 238 aa18.34■□□□□ 0.53
U2AF1-201ENST00000291552 NARS2Q96I59 477 aaKnown RBP18.34■□□□□ 0.53
U2AF1-201ENST00000291552 H3BMQ9 156 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 DEDDO75618 318 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 TNFSF8P32971 234 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 DHRS2Q13268 280 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 ACY3Q96HD9 319 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 MFFQ9GZY8 342 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 HSPB7Q9UBY9 170 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 RSL24D1Q9UHA3 163 aaKnown RBP18.33■□□□□ 0.52
U2AF1-201ENST00000291552 SCP2D1Q9UJQ7 156 aa18.33■□□□□ 0.52
U2AF1-201ENST00000291552 A0A0B4J2A0 478 aa18.32■□□□□ 0.52
U2AF1-201ENST00000291552 IL4P05112 153 aa18.32■□□□□ 0.52
U2AF1-201ENST00000291552 RBMY1A1P0DJD3 496 aaKnown RBP18.32■□□□□ 0.52
U2AF1-201ENST00000291552 RBMY1CP0DJD4 496 aa18.32■□□□□ 0.52
U2AF1-201ENST00000291552 RBMY1FQ15415 496 aaKnown RBP18.32■□□□□ 0.52
U2AF1-201ENST00000291552 MCUBQ9NWR8 336 aa18.32■□□□□ 0.52
U2AF1-201ENST00000291552 SHPKQ9UHJ6 478 aa18.32■□□□□ 0.52
U2AF1-201ENST00000291552 IGHV4-28A0A0C4DH34 117 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 TOMM40O96008 361 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 SPP1P10451 314 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 AKR1C4P17516 323 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 SMCO1Q147U7 214 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 ACTL10Q5JWF8 245 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 LGALS9CQ6DKI2 356 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 RBKSQ9H477 322 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 KCNIP3Q9Y2W7 256 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 X6R8D5 127 aa18.31■□□□□ 0.52
U2AF1-201ENST00000291552 HELTA6NFD8 242 aa18.3■□□□□ 0.52
U2AF1-201ENST00000291552 CCR6P51684 374 aa18.3■□□□□ 0.52
U2AF1-201ENST00000291552 ETFRF1Q6IPR1 90 aa18.3■□□□□ 0.52
U2AF1-201ENST00000291552 MORN3Q6PF18 240 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-201ENST00000291552 DTD1Q8TEA8 209 aa18.3■□□□□ 0.52
U2AF1-201ENST00000291552 HECTD4Q9Y4D8 3996 aa18.3■□□□□ 0.52
U2AF1-201ENST00000291552 ZNF705EA8MWA4 302 aaPredicted RBP18.29■□□□□ 0.52
U2AF1-201ENST00000291552 FAM90A26D6RGX4 464 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 BUB3O43684 328 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 IFNA10P01566 189 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 KLF9Q13886 244 aaPredicted RBP18.29■□□□□ 0.52
U2AF1-201ENST00000291552 PSMG4Q5JS54 123 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 CSNK1G2-AS1Q8NCQ2 148 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 TRIM63Q969Q1 353 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 CLEC5AQ9NY25 188 aa18.29■□□□□ 0.52
U2AF1-201ENST00000291552 FABP12A6NFH5 140 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 RD3LP0DJH9 198 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 PSG1P11464 419 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 TMEM41BQ5BJD5 291 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 NOXA1Q86UR1 476 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 LGI3Q8N145 548 aa18.28■□□□□ 0.52
U2AF1-201ENST00000291552 OR51G1Q8NGK1 321 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms