RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SMIM27A0A1W2PRY6 76 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF672Q499Z4 452 aaPredicted RBP14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 PNKDQ8N490 385 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 RAB9BQ9NP90 201 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 ZFP30Q9Y2G7 519 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF324O75467 553 aaPredicted RBP14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 DLX1P56177 255 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 TAS2R45P59539 299 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 PRB3Q04118 309 aaPredicted RBP14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 ACACBO00763 2458 aa14.81□□□□□ -0.04
PDLIM3-201ENST00000284767 POU2AF1Q16633 256 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 ADTRPQ96IZ2 230 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 RCHY1Q96PM5 261 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 LINC00574Q9H8X3 128 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 NDUFB3O43676 98 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 SPINK4O60575 86 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 PPOXP50336 477 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 IBA57Q5T440 356 aaKnown RBP14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF503Q96F45 646 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF714Q96N38 554 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 PLEKHA3Q9HB20 300 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 PRNDQ9UKY0 176 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 CBY1Q9Y3M2 126 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 OR51B2Q9Y5P1 312 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 A0A1W2PRE2 83 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 BMPR1BO00238 502 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 PMCHP20382 165 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 SRIP30626 198 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 PRRX1P54821 245 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 FXYD3Q14802 87 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 KIAA1644Q3SXP7 199 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 C19orf35Q6ZS72 473 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 IGF2BP2-AS1Q96M15 143 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF257Q9Y2Q1 563 aa14.8□□□□□ -0.04
PDLIM3-201ENST00000284767 MALRD1Q5VYJ5 2156 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 GGTLC3B5MD39 225 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 IGLV2-8P01709 118 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 ATP5IP56385 69 aaPredicted RBP14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 LRRC10Q5BKY1 277 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 SLC25A48Q6ZT89 311 aaKnown RBP14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 OR7C2O60412 319 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 IGLC2P0DOY2 106 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 IGLC3P0DOY3 106 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 COMMD5Q9GZQ3 224 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 CDC42EP3Q9UKI2 254 aa14.79□□□□□ -0.04
PDLIM3-201ENST00000284767 SPTAN1Q13813 2472 aaKnown RBP14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 SVEP1Q4LDE5 3571 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 MYOD1P15172 320 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 REG1BP48304 166 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 PRCDQ00LT1 54 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 MRPL27Q9P0M9 148 aaKnown RBP14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 AKAP6Q13023 2319 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 IGKV1-16P04430 117 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 TCL1AP56279 114 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 DIAPH2-AS1Q14236 149 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 RASL11AQ6T310 242 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 NIT1Q86X76 327 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 KLHDC1Q8N7A1 406 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 HINT2Q9BX68 163 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 GAL3ST2Q9H3Q3 398 aa14.78□□□□□ -0.04
PDLIM3-201ENST00000284767 TNCP24821 2201 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 J3QR06 171 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 APCSP02743 223 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 C3orf79P0CE67 100 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 CT45A6P0DMU7 189 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 CT45A5P0DMU8 189 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 CT45A7P0DMV0 189 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 SLC35B1P78383 322 aa14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 MEF2CQ06413 473 aaPredicted RBP14.77□□□□□ -0.04
PDLIM3-201ENST00000284767 IGSF10Q6WRI0 2623 aa14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 HYPMO75409 117 aa14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 MMDQ15546 238 aa14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 MRPL54Q6P161 138 aaKnown RBP14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 WIPF2Q8TF74 440 aaPredicted RBP14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 TSKUQ8WUA8 353 aa14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 SLC35D1Q9NTN3 355 aa14.77□□□□□ -0.05
PDLIM3-201ENST00000284767 A0A1W2PPR1 153 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 MGST1P10620 155 aaKnown RBP14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 BORCS7Q96B45 105 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 TXN2Q99757 166 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 MRPL32Q9BYC8 188 aaKnown RBP14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 IGKV1OR2-108A0A075B7D4 117 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 C8orf88P0DMB2 117 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 GNLYP22749 145 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 TFPI2P48307 235 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 HNRNPA3P51991 378 aaKnown RBP14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 C2orf83Q53S99 150 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 C11orf42Q8N5U0 333 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 ZNF331Q9NQX6 463 aaPredicted RBP14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 SERTAD4Q9NUC0 356 aa14.76□□□□□ -0.05
PDLIM3-201ENST00000284767 Q6ZN92 141 aa14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 SLC25A33Q9BSK2 321 aa14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 SRRM4A7MD48 611 aaKnown RBP14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 UPK2O00526 184 aa14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 USF1P22415 310 aaPredicted RBP14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 DMRTA1Q5VZB9 504 aa14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 MRPL20Q9BYC9 149 aaKnown RBP14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 KAAG1Q9UBP8 84 aa14.75□□□□□ -0.05
PDLIM3-201ENST00000284767 LAMTOR2Q9Y2Q5 125 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms