RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 FAM106CPP0CH98 169 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 ZNF90Q03938 601 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 TMEM95Q3KNT9 176 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 MBD6Q96DN6 1003 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 ATP6V0E1O15342 81 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 SNRPCP09234 159 aaKnown RBP9.24□□□□□ -0.93
SSRP1-201ENST00000278412 SFTA3P0C7M3 94 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 S100A2P29034 98 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 ERHP84090 104 aaKnown RBP9.24□□□□□ -0.93
SSRP1-201ENST00000278412 ECSCRQ19T08 205 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 AKIRIN2Q53H80 203 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 C2orf83Q53S99 150 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 ZNF48Q96MX3 618 aaPredicted RBP9.24□□□□□ -0.93
SSRP1-201ENST00000278412 GGTLC1Q9BX51 225 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
SSRP1-201ENST00000278412 TSTD3H0UI37 97 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 MAS1LP35410 378 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 BPIFB3P59826 476 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 RAB11AP62491 216 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 FFAR4Q5NUL3 377 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 HIST2H2BDQ6DRA6 164 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 SPSB3Q6PJ21 355 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 GAR1Q9NY12 217 aaKnown RBP9.23□□□□□ -0.93
SSRP1-201ENST00000278412 LSM4Q9Y4Z0 139 aaKnown RBP9.23□□□□□ -0.93
SSRP1-201ENST00000278412 CD5P06127 495 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 KRTAP1-1Q07627 177 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 ARPC1AQ92747 370 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 RCC1LQ96I51 464 aaKnown RBP9.23□□□□□ -0.93
SSRP1-201ENST00000278412 NOL4LQ96MY1 436 aaPredicted RBP9.23□□□□□ -0.93
SSRP1-201ENST00000278412 RARRES2Q99969 163 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 F8P00451 2351 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 MBP02144 154 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 RND2P52198 227 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 EIF5AP63241 154 aaKnown RBP9.23□□□□□ -0.93
SSRP1-201ENST00000278412 CD69Q07108 199 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 C5orf56Q8N8D9 126 aa9.23□□□□□ -0.93
SSRP1-201ENST00000278412 OOSP1A8MZH6 123 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 OR10J1P30954 320 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 AKR1C8PQ5T2L2 129 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 MORN5Q5VZ52 161 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 RPS10P5Q9NQ39 176 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 DOK5Q9P104 306 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 IGKV1D-37A0A075B6S9 117 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 A0A1W2PN81 502 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 MT-CO2P00403 227 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 BRS3P32247 399 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 CHRNA7P36544 502 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
SSRP1-201ENST00000278412 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
SSRP1-201ENST00000278412 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
SSRP1-201ENST00000278412 PRB4P10163 310 aaPredicted RBP9.21□□□□□ -0.93
SSRP1-201ENST00000278412 DLK1P80370 383 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 EIF5AL1Q6IS14 154 aaKnown RBP9.21□□□□□ -0.93
SSRP1-201ENST00000278412 ZNF562Q6V9R5 426 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 STPG3Q8N7X2 389 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 RNF5Q99942 180 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 SCRT1Q9BWW7 348 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.93
SSRP1-201ENST00000278412 PXMP4Q9Y6I8 212 aa9.21□□□□□ -0.93
SSRP1-201ENST00000278412 RPP30P78346 268 aaKnown RBP9.21□□□□□ -0.94
SSRP1-201ENST00000278412 HAGHQ16775 308 aa9.21□□□□□ -0.94
SSRP1-201ENST00000278412 SAT2Q96F10 170 aaPredicted RBP9.21□□□□□ -0.94
SSRP1-201ENST00000278412 MS4A10Q96PG2 267 aa9.21□□□□□ -0.94
SSRP1-201ENST00000278412 FANCD2OSQ96PS1 177 aa9.21□□□□□ -0.94
SSRP1-201ENST00000278412 MEGF9Q9H1U4 602 aa9.21□□□□□ -0.94
SSRP1-201ENST00000278412 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
SSRP1-201ENST00000278412 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 IGHV3-35A0A0C4DH35 117 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 LINC00869P0C866 280 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 AKR1C3P42330 323 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 C10orf99Q6UWK7 81 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 UHRF2Q96PU4 802 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 K7EIM0 57 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 ATP6V1FQ16864 119 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 TEPPQ6URK8 271 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
SSRP1-201ENST00000278412 SEC14L6B5MCN3 397 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR2J3O76001 311 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 TSPAN15O95858 294 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
SSRP1-201ENST00000278412 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
SSRP1-201ENST00000278412 AWAT1Q58HT5 328 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 PRSS57Q6UWY2 283 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 SPNS3Q6ZMD2 512 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR10G4Q8NGN3 311 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR10G9Q8NGN4 311 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR10G7Q8NGN6 311 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR10D4PQ8NGN7 298 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 A6NDX4 124 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms