RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 GNB4Q9HAV0 340 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 DOCK8Q8NF50 2099 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 CD55P08174 381 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 CSRP3P50461 194 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 C9orf40Q8IXQ3 194 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 C11orf68Q9H3H3 251 aaKnown RBP7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 GTF3C1Q12789 2109 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 SRD5A1P18405 259 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 SSBP1Q04837 148 aaKnown RBP7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 CD226Q15762 336 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 SYT14P1Q58G82 188 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 Q6Q795 121 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 IGFBPL1Q8WX77 278 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 A0A0C4DFX4 3053 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 SPATA12Q7Z6I5 190 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 RNF138Q8WVD3 245 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 LINC00312Q9Y6C7 94 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 IGLV3-16A0A075B6K0 115 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 CIARTQ8N365 385 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 STARD5Q9NSY2 213 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 GREB1Q4ZG55 1949 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 TRAV4A0A0B4J268 109 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 A0A1B0GTL3 188 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 RBAKDNA6NC62 111 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 LMO7DNF2Z398 122 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 K7N7A8 449 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 SYNGR2O43760 224 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 CXCL12P48061 93 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 TMEM52BQ4KMG9 183 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 MMD2Q8IY49 270 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 PTPRDP23468 1912 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 UPK2O00526 184 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 GASTP01350 101 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 CSRP1P21291 193 aaKnown RBP7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 LMO1P25800 156 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 TMEM187Q14656 261 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 ORMDL2Q53FV1 153 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 CEND1Q8N111 149 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 OTOSQ8NHW6 89 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 FGF14Q92915 247 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 DEPPQ9NTK1 212 aa7.33□□□□□ -1.24
CTDSPL-201ENST00000273179 LAMA1P25391 3075 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 UBE2L6O14933 153 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 FKBP2P26885 142 aaKnown RBP7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 PLGLB1Q02325 96 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 FOXF2Q12947 444 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 ZNF141Q15928 474 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 RFLNAQ6ZTI6 216 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 RPRMQ9NS64 109 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 WDR83OSQ9Y284 106 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 DPTQ07507 201 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 DRAM1Q8N682 238 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 IL1F10Q8WWZ1 152 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 BADQ92934 168 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 SYNJ2BPP57105 145 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 FAM90A1Q86YD7 464 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 FAM57AQ8TBR7 257 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 SPRY4Q9C004 299 aa7.32□□□□□ -1.24
CTDSPL-201ENST00000273179 Q0VG73 95 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 CCL26Q9Y258 94 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 NEURL3Q96EH8 262 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 DNAJB12Q9NXW2 375 aaKnown RBP7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 WDR87Q6ZQQ6 2873 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TIMM23O14925 209 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 LY6DQ14210 128 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 IER5LQ5T953 404 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 Q9UF83 564 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 MYOFQ9NZM1 2061 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TRANK1O15050 2925 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 TRAV1-2A0A0B4J238 106 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 CCL20P78556 96 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 CNRIP1Q96F85 164 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 LINC00527Q9UJ94 153 aa7.31□□□□□ -1.24
CTDSPL-201ENST00000273179 FAM157AC9JC47 383 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 GHRHP01286 108 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 COX8AP10176 69 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 GP9P14770 177 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 ZNF493Q6ZR52 646 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 LINC00479Q96M42 142 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 DYSFO75923 2080 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 DSPPQ9NZW4 1301 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 A0A1W2PS18 150 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 H3BSH0 61 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 ATOX1O00244 68 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 IGKCP01834 107 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 IGHG4P01861 327 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 ATP5G1P05496 136 aa7.3□□□□□ -1.24
CTDSPL-201ENST00000273179 CLDN17P56750 224 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms