RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 CCDC168Q8NDH2 2452 aa7.04□□□□□ -1.28
TRIM43-201ENST00000272395 SRRM4A7MD48 611 aaKnown RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 K7EN84 100 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 FOXH1O75593 365 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 MMP23AO75900 390 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 IGKV1-16P04430 117 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 C8orf88P0DMB2 117 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 OR10J1P30954 320 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 SUB1P53999 127 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 RPL8P62917 257 aaKnown RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 TIGITQ495A1 244 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 WDR73Q6P4I2 378 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 MAPK1IP1LQ8NDC0 245 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 TMEM167AQ8TBQ9 72 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 C10orf105Q8TEF2 133 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 FAM168AQ92567 244 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 TMEM186Q96B77 213 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 HARBI1Q96MB7 349 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 NDUFAF3Q9BU61 184 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 GNB1LQ9BYB4 327 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ARFGEF3Q5TH69 2177 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 IGKV1OR2-108A0A075B7D4 117 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 H0YJW9 148 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ISLRO14498 428 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ACTL6BO94805 426 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ZNF137PP52743 207 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 RAB4BP61018 213 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 RANP62826 216 aaKnown RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 Q0VG73 95 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 CENPWQ5EE01 88 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 PRSS57Q6UWY2 283 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 MMD2Q8IY49 270 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 CIARTQ8N365 385 aaPredicted RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 OR1L4Q8NGR5 311 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 FLYWCH2Q96CP2 140 aaKnown RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 MRPL20Q9BYC9 149 aaKnown RBP7.03□□□□□ -1.28
TRIM43-201ENST00000272395 BPESC1Q9GZL8 116 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 TMEM106BQ9NUM4 274 aa7.03□□□□□ -1.28
TRIM43-201ENST00000272395 PRRC2AP48634 2157 aaKnown RBP7.02□□□□□ -1.29
TRIM43-201ENST00000272395 PPIAL4EA0A075B759 164 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 ZNF705GA8MUZ8 300 aaPredicted RBP7.02□□□□□ -1.29
TRIM43-201ENST00000272395 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 PPIAL4DF5H284 164 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 OR7C2O60412 319 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 PPIAL4FP0DN26 164 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 MYOD1P15172 320 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 MC5RP33032 325 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 ADMP35318 185 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 TPPP2P59282 170 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 TAS2R60P59551 318 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 LRRC10Q5BKY1 277 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 TMEM200BQ69YZ2 307 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 OR9G1Q8NH87 305 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 CMTM2Q8TAZ6 248 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 ZNF503Q96F45 646 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
TRIM43-201ENST00000272395 DNAJC4Q9NNZ3 241 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 WASHC3Q9Y3C0 194 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 PPIAL4AQ9Y536 164 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 V9GYV3 84 aa7.02□□□□□ -1.29
TRIM43-201ENST00000272395 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 IGHV4-61A0A0C4DH41 118 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 PSMB11A5LHX3 300 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 VWC2LB2RUY7 222 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 TMEM178BH3BS89 294 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 TNFRSF13BO14836 293 aaPredicted RBP7.01□□□□□ -1.29
TRIM43-201ENST00000272395 SMAD7O15105 426 aaKnown RBP7.01□□□□□ -1.29
TRIM43-201ENST00000272395 NDUFB3O43676 98 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 CRISP2P16562 243 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 CRYBB3P26998 211 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 DSCR9P59020 149 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 SSTP61278 116 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 CX3CL1P78423 397 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 PRSS8Q16651 343 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 OR1L6Q8NGR2 347 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 OR10X1Q8NGY0 326 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 MS4A10Q96PG2 267 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 PIMREGQ9BSJ6 248 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 KAAG1Q9UBP8 84 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 NAGKQ9UJ70 344 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 CDC42EP3Q9UKI2 254 aa7.01□□□□□ -1.29
TRIM43-201ENST00000272395 A0A096LNT2 108 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 GGTLC3B5MD39 225 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 SLC17A3O00476 420 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 FCN1O00602 326 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 COX7A2P2O60397 106 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 HNF1AP20823 631 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 CBLN1P23435 193 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 GPR6P46095 362 aaPredicted RBP7□□□□□ -1.29
TRIM43-201ENST00000272395 LGALS7P47929 136 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 BPIFB3P59826 476 aa7□□□□□ -1.29
TRIM43-201ENST00000272395 VMA21Q3ZAQ7 101 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms