RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
SF3B4-201ENST00000271628 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
SF3B4-201ENST00000271628 LPAR2Q9HBW0 351 aa12.23□□□□□ -0.45
SF3B4-201ENST00000271628 LINC00869P0C866 280 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 OR10J1P30954 320 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 HES1Q14469 280 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 OR2T6Q8NHC8 308 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 C10orf105Q8TEF2 133 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 NDUFB4O95168 129 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 REG1AP05451 166 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 ATP5J2P56134 94 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 DEFA6Q01524 100 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 FOXL1Q12952 345 aa12.22□□□□□ -0.45
SF3B4-201ENST00000271628 JOSD1Q15040 202 aaPredicted RBP12.22□□□□□ -0.45
SF3B4-201ENST00000271628 FNDC4Q9H6D8 234 aaPredicted RBP12.22□□□□□ -0.45
SF3B4-201ENST00000271628 TEX22C9J3V5 150 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 CNIH1O95406 144 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 RD3LP0DJH9 198 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 ATP5G3P48201 142 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 PKIAP61925 76 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 EBI3Q14213 229 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 C22orf15Q8WYQ4 148 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 TBX15Q96SF7 602 aa12.21□□□□□ -0.45
SF3B4-201ENST00000271628 SEPSECSQ9HD40 501 aaKnown RBP12.21□□□□□ -0.45
SF3B4-201ENST00000271628 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.45
SF3B4-201ENST00000271628 FCN1O00602 326 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 AREGP15514 252 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 UBE2G2P60604 165 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 SELENOTP62341 195 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 NPIPB3Q92617 1050 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 USP9XQ93008 2570 aaPredicted RBP12.2□□□□□ -0.46
SF3B4-201ENST00000271628 VWC2LB2RUY7 222 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 TSTD3H0UI37 97 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 AMBPP02760 352 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 THAP8Q8NA92 274 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 MISP3Q96FF7 219 aa12.2□□□□□ -0.46
SF3B4-201ENST00000271628 MYO18BQ8IUG5 2567 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 CRYGCP07315 174 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 COX6B1P14854 86 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 SSBP2P81877 361 aaPredicted RBP12.19□□□□□ -0.46
SF3B4-201ENST00000271628 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 RNF2Q99496 336 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 FUT9Q9Y231 359 aa12.19□□□□□ -0.46
SF3B4-201ENST00000271628 SPTAN1Q13813 2472 aaKnown RBP12.19□□□□□ -0.46
SF3B4-201ENST00000271628 TCRBV4S1A1TA0A5B7 111 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 CD24P25063 80 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 BRS3P32247 399 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 DSCR9P59020 149 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 DYNAPQ8N1N2 210 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 TMEM116Q8NCL8 245 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 OR5T1Q8NG75 326 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 TMEM37Q8WXS4 190 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 SFRP2Q96HF1 295 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 GCGP01275 180 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 TAS2R45P59539 299 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 PAX8Q06710 450 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 Q8N6K4 173 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 C1RLQ9NZP8 487 aa12.18□□□□□ -0.46
SF3B4-201ENST00000271628 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
SF3B4-201ENST00000271628 OR5G3P0C626 314 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 APELAP0DMC3 54 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 GZMBP10144 247 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
SF3B4-201ENST00000271628 MFAP2P55001 183 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 FXYD3Q14802 87 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
SF3B4-201ENST00000271628 TECRQ9NZ01 308 aaKnown RBP12.17□□□□□ -0.46
SF3B4-201ENST00000271628 AKAP6Q13023 2319 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 MDFIC2A0A1B0GVS7 189 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 PAX1P15863 534 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 TMEM11P17152 192 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 GCHFRP30047 84 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 CNN1P51911 297 aaKnown RBP12.17□□□□□ -0.46
SF3B4-201ENST00000271628 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 DNAJC4Q9NNZ3 241 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 NAV3Q8IVL0 2385 aa12.17□□□□□ -0.46
SF3B4-201ENST00000271628 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
SF3B4-201ENST00000271628 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
SF3B4-201ENST00000271628 NCBP2LA6PVI3 153 aaKnown RBP12.16□□□□□ -0.46
SF3B4-201ENST00000271628 SAA4P35542 130 aa12.16□□□□□ -0.46
SF3B4-201ENST00000271628 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
SF3B4-201ENST00000271628 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
SF3B4-201ENST00000271628 TMEM167BQ9NRX6 74 aa12.16□□□□□ -0.46
SF3B4-201ENST00000271628 ARL2-SNX15V9GYD0 113 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms