RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ARL16Q0P5N6 197 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 LRRC37A5PQ49AS3 106 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 TMEM190Q8WZ59 177 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 C20orf24Q9BUV8 137 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 MED28Q9H204 178 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 H0YIZ8 118 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 YIF1AO95070 293 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 FOLR2P14207 255 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 OR10J1P30954 320 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 BCAP31P51572 246 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 RELQ04864 619 aaPredicted RBP9.68□□□□□ -0.86
SS18-202ENST00000269138 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 ZNF600Q6ZNG1 722 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 OR11H7Q8NGC8 314 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 SLC35E1Q96K37 410 aa9.68□□□□□ -0.86
SS18-202ENST00000269138 IGKV1D-37A0A075B6S9 117 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 A8MWP6 167 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 DEDDO75618 318 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 CBLN1P23435 193 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 INSL3P51460 131 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 CAV2P51636 162 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 RRAS2P62070 204 aaPredicted RBP9.67□□□□□ -0.86
SS18-202ENST00000269138 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
SS18-202ENST00000269138 ACOT7LQ6ZUV0 252 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 OR1S2Q8NGQ3 325 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 PPP1R1CQ8WVI7 109 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 OR5AC2Q9NZP5 309 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
SS18-202ENST00000269138 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
SS18-202ENST00000269138 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 IGSF23A1L1A6 192 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 PVALBP20472 110 aaPredicted RBP9.66□□□□□ -0.86
SS18-202ENST00000269138 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 IGHV3-49A0A0A0MS15 119 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 IZUMO1RA6ND01 250 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 CST7O76096 145 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
SS18-202ENST00000269138 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
SS18-202ENST00000269138 DEFA6Q01524 100 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 ZNF90Q03938 601 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 OR10P1Q8NGE3 313 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 DAZ1Q9NQZ3 744 aaKnown RBP9.66□□□□□ -0.86
SS18-202ENST00000269138 LYRM2Q9NU23 88 aaPredicted RBP9.66□□□□□ -0.86
SS18-202ENST00000269138 MLXQ9UH92 298 aa9.66□□□□□ -0.86
SS18-202ENST00000269138 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 SMCO3A2RU48 225 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 ZFP92A6NM28 416 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 K7EMT4 169 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 MPC2O95563 127 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 RLN2P04090 185 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 DLK1P80370 383 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 CD300EQ496F6 205 aaPredicted RBP9.65□□□□□ -0.86
SS18-202ENST00000269138 TMEM252Q8N6L7 170 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 DYNLRB2Q8TF09 96 aa9.65□□□□□ -0.86
SS18-202ENST00000269138 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
SS18-202ENST00000269138 IGHV3OR16-13A0A075B7E8 117 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 IGHV3-74A0A0B4J1X5 117 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
SS18-202ENST00000269138 RD3LP0DJH9 198 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 PSG1P11464 419 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 AKR1C1Q04828 323 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 OR2F1Q13607 317 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 BTNL8Q6UX41 500 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 TMEM217Q8N7C4 229 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 Q8WTZ3 238 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 PRR25Q96S07 402 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 TRGV9Q99603 122 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 MRPL27Q9P0M9 148 aaKnown RBP9.64□□□□□ -0.87
SS18-202ENST00000269138 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
SS18-202ENST00000269138 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 TRAV14DV4A0A0A6YYC5 116 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 E5RGE8 158 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 SCAF4O95104 1147 aaKnown RBP9.63□□□□□ -0.87
SS18-202ENST00000269138 TOMM40O96008 361 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 SULT1A1P50225 295 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 SLC38A11Q08AI6 406 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 Q5BKY6 102 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
SS18-202ENST00000269138 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 MARC2Q969Z3 335 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 MBD2Q9UBB5 411 aa9.63□□□□□ -0.87
SS18-202ENST00000269138 IGHV3-66A0A0C4DH42 116 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 CHEK1O14757 476 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 GATA2P23769 480 aaPredicted RBP9.62□□□□□ -0.87
SS18-202ENST00000269138 P2RY1P47900 373 aa9.62□□□□□ -0.87
SS18-202ENST00000269138 NHLH2Q02577 135 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms