RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 GALR1P47211 349 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 RAB31Q13636 194 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 GAMTQ14353 236 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 TMEM144Q7Z5S9 345 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 KCNIP2Q9NS61 270 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 PXMP4Q9Y6I8 212 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 IGHV1-69DA0A0B4J2H0 117 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 IGHV1-69P01742 117 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 FAM106CPP0CH98 169 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 APELAP0DMC3 54 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 PPP5D1E7EU14 171 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 PDE6DO43924 150 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 SRP14P37108 136 aaKnown RBP16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 DEFB113Q30KQ7 82 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 FAM120AOSQ5T036 256 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 MIC13Q5XKP0 118 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 PVRIGQ6DKI7 326 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 OR51G1Q8NGK1 321 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 SSMEM1Q8WWF3 244 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 BTF3L4Q96K17 158 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 SLC35E1Q96K37 410 aa16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 SRSF8Q9BRL6 282 aaKnown RBP16.36■□□□□ 0.21
LYSMD2-201ENST00000267838 IGHV3OR16-10A0A075B7F0 116 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 A0A096LNT2 108 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 TRAV40A0A0B4J280 105 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 NCBP2LA6PVI3 153 aaKnown RBP16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 HMGB3O15347 200 aaKnown RBP16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 FAM3BP58499 235 aaPredicted RBP16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 RUSC1-AS1Q66K80 236 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 TMEM183AQ8IXX5 376 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 OR4X1Q8NH49 305 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 TXNDC17Q9BRA2 123 aa16.35■□□□□ 0.21
LYSMD2-201ENST00000267838 PAGE4O60829 102 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 HIST1H1BP16401 226 aaKnown RBP16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 GFI1BQ5VTD9 330 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 LRRC75A-AS1Q8N1F1 130 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 FNDC4Q9H6D8 234 aaPredicted RBP16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 C7orf69Q9H7B7 122 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 ZMAT5Q9UDW3 170 aaKnown RBP16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 NAV3Q8IVL0 2385 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 CENPEQ02224 2701 aa16.34■□□□□ 0.21
LYSMD2-201ENST00000267838 FBN2P35556 2912 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 C11orf94C9JXX5 98 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 F6UZH7 168 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 CD99P14209 185 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 FABP4P15090 132 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 RPL29P47914 159 aaKnown RBP16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 MFAP2P55001 183 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 FXYD3Q14802 87 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 GCSAMLQ5JQS6 135 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 KCNIP4Q6PIL6 250 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 STPG3Q8N7X2 389 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 OR1P1Q8NH06 330 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 OR2T6Q8NHC8 308 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 ASH1LQ9NR48 2969 aaKnown RBP16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 HIF1ANQ9NWT6 349 aa16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 F11RQ9Y624 299 aaKnown RBP16.33■□□□□ 0.21
LYSMD2-201ENST00000267838 IGKV1OR2-108A0A075B7D4 117 aa16.33■□□□□ 0.2
LYSMD2-201ENST00000267838 C19orf35Q6ZS72 473 aa16.33■□□□□ 0.2
LYSMD2-201ENST00000267838 ACY3Q96HD9 319 aa16.33■□□□□ 0.2
LYSMD2-201ENST00000267838 PACRGQ96M98 296 aaPredicted RBP16.33■□□□□ 0.2
LYSMD2-201ENST00000267838 C1RLQ9NZP8 487 aa16.33■□□□□ 0.2
LYSMD2-201ENST00000267838 GCN1Q92616 2671 aaKnown RBP16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 GGCTO75223 188 aaKnown RBP16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 PDZD11Q5EBL8 140 aa16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 COA6Q5JTJ3 125 aaKnown RBP16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 MISP3Q96FF7 219 aa16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 SLC45A2Q9UMX9 530 aa16.32■□□□□ 0.2
LYSMD2-201ENST00000267838 A0A1W2PPV4 95 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 TYMSP04818 313 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 DEFA4P12838 97 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 GATA3P23771 443 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 OR10J1P30954 320 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PRR20EP86478 221 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PRR20CP86479 221 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PRR20DP86480 221 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PRR20BP86481 221 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PRR20AP86496 221 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 ETFRF1Q6IPR1 90 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 ZNF562Q6V9R5 426 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 BRD3OSQ6XYD6 125 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 LINC01356Q8N9X3 169 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 OR5R1Q8NH85 324 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 GATAD1Q8WUU5 269 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 PSMG3-AS1Q96PY0 264 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 CORTO00230 105 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 IGHV4-38-2P0DP08 117 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 Q8N9W7 124 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 NECAP1Q8NC96 275 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 HIST1H2BLQ99880 126 aa16.31■□□□□ 0.2
LYSMD2-201ENST00000267838 LINC00869P0C866 280 aa16.3■□□□□ 0.2
LYSMD2-201ENST00000267838 CX3CL1P78423 397 aa16.3■□□□□ 0.2
LYSMD2-201ENST00000267838 LOXL1Q08397 574 aaPredicted RBP16.3■□□□□ 0.2
LYSMD2-201ENST00000267838 FAM103A1Q9BTL3 118 aaKnown RBP16.3■□□□□ 0.2
LYSMD2-201ENST00000267838 ANKRD17O75179 2603 aaKnown RBP16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 IGHV3-48P01763 117 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 CRYGCP07315 174 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 NPIPB3Q92617 1050 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 ARPC1AQ92747 370 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 IMMP2LQ96T52 175 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms