RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 C10orf113Q5VZT2 155 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 FAM215AQ9Y5M1 114 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 DLL1O00548 723 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 PEX7O00628 323 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 ORM2P19652 201 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
RTN1-201ENST00000267484 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 RITA1Q96K30 269 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 CSMD1Q96PZ7 3565 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 PIEZO2Q9H5I5 2752 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 H0YJW9 148 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 TCF21O43680 179 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 HINT1P49773 126 aaPredicted RBP13.65□□□□□ -0.22
RTN1-201ENST00000267484 ERHP84090 104 aaKnown RBP13.65□□□□□ -0.22
RTN1-201ENST00000267484 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 M0R296 226 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 SIAH2O43255 324 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 HSBP1O75506 76 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 DLX1P56177 255 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 EBLN2Q6P2I7 272 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 TCF24Q7RTU0 167 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 RAB9BQ9NP90 201 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 UQCR10Q9UDW1 63 aa13.65□□□□□ -0.22
RTN1-201ENST00000267484 NDUFB8O95169 186 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 TBR1Q16650 682 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 HCP5Q6MZN7 132 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 DEFB124Q8NES8 71 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 H1FXQ92522 213 aaKnown RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 IGKV1D-37A0A075B6S9 117 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 MBD3L4A6NDZ8 208 aaPredicted RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 MBD3L3A6NE82 208 aaPredicted RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 MBD3L5A6NJ08 208 aaPredicted RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 GATA4P43694 442 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 OR2D3Q8NGH3 330 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 MBD3L2Q8NHZ7 208 aaPredicted RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 FOXA3P55318 350 aaPredicted RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 LINC00305Q7Z4B0 112 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
RTN1-201ENST00000267484 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
RTN1-201ENST00000267484 hADV38S2A0JD32 116 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 M0R2Z0 102 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 APOA2P02652 100 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 IGFL2Q6UWQ7 119 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
RTN1-201ENST00000267484 PNKDQ8N490 385 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 FXYD5Q96DB9 178 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 LAMTOR2Q9Y2Q5 125 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 RBMXL3Q8N7X1 1067 aaKnown RBP13.63□□□□□ -0.23
RTN1-201ENST00000267484 C19orf24Q9BVV8 132 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 MRPL32Q9BYC8 188 aaKnown RBP13.63□□□□□ -0.23
RTN1-201ENST00000267484 ZNF430Q9H8G1 570 aaPredicted RBP13.63□□□□□ -0.23
RTN1-201ENST00000267484 SAP30LQ9HAJ7 183 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
RTN1-201ENST00000267484 FAM169BQ8N8A8 192 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 ST6GALNAC6Q969X2 333 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 SLC25A17O43808 307 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 SELENOVP59797 346 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 GAGE1Q13065 139 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 Q71RC1 249 aaPredicted RBP13.62□□□□□ -0.23
RTN1-201ENST00000267484 MRPL52Q86TS9 123 aaKnown RBP13.62□□□□□ -0.23
RTN1-201ENST00000267484 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
RTN1-201ENST00000267484 TNFRSF19Q9NS68 423 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 TOX4O94842 621 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
RTN1-201ENST00000267484 OR10X1Q8NGY0 326 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
RTN1-201ENST00000267484 ZNF714Q96N38 554 aa13.62□□□□□ -0.23
RTN1-201ENST00000267484 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 COX19Q49B96 90 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 NCOR1P1Q9H4R4 102 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 TMEM200BQ69YZ2 307 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 UNQ5815/PRO19632Q6UWF5 114 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 CACNG8Q8WXS5 425 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 GRAMD2BQ96HH9 432 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 ASCL3Q9NQ33 180 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 PGPA6NDG6 321 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 FSTL3O95633 263 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 UBE2G1P62253 170 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 LYPD2Q6UXB3 125 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 ALKBH7Q9BT30 221 aaPredicted RBP13.61□□□□□ -0.23
RTN1-201ENST00000267484 ZFP30Q9Y2G7 519 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
RTN1-201ENST00000267484 AKAP13Q12802 2813 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 TCRBV4S1A1TA0A5B7 111 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 C22orf46C9J442 243 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 CD40P25942 277 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 ZNF137PP52743 207 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 ENSAO43768 121 aaKnown RBP13.6□□□□□ -0.23
RTN1-201ENST00000267484 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 LINC00574Q9H8X3 128 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 TM4SF5O14894 197 aa13.6□□□□□ -0.23
RTN1-201ENST00000267484 TNFSF4P23510 183 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms