RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 PYYP10082 97 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 COX7A1P24310 79 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 ADMP35318 185 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 CASP6P55212 293 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
CPSF6-201ENST00000266679 TNXAQ16473 311 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 HCP5Q6MZN7 132 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 MISP3Q96FF7 219 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 DNAJC4Q9NNZ3 241 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 TCRBV4S1A1TA0A5B7 111 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 SIAH2O43255 324 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 CBLN1P23435 193 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 RPEL1Q2QD12 228 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 MUC15Q8N387 334 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 RNF2Q99496 336 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 ZNF355PQ9NSJ1 428 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 PLXNB1O43157 2135 aa10.36□□□□□ -0.75
CPSF6-201ENST00000266679 MOSP00540 346 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 RUSC1-AS1Q66K80 236 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 THAP8Q8NA92 274 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 OR1L6Q8NGR2 347 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 OR1L4Q8NGR5 311 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
CPSF6-201ENST00000266679 PRO1933Q9H354 126 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 V9GYV3 84 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 CREBBPQ92793 2442 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 IGHV3-21A0A0B4J1V1 117 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 A0A1W2PRE2 83 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 IGLC7A0M8Q6 106 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 RPL27AP46776 148 aaKnown RBP10.35□□□□□ -0.75
CPSF6-201ENST00000266679 LGALS7P47929 136 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 LGALS4P56470 323 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 BPIFB3P59826 476 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 FXYD3Q14802 87 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
CPSF6-201ENST00000266679 TIGITQ495A1 244 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 PATE2Q6UY27 113 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 OR5R1Q8NH85 324 aa10.35□□□□□ -0.75
CPSF6-201ENST00000266679 CCL21O00585 134 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 SNRPCP09234 159 aaKnown RBP10.34□□□□□ -0.75
CPSF6-201ENST00000266679 MGST1P10620 155 aaKnown RBP10.34□□□□□ -0.75
CPSF6-201ENST00000266679 CA7P43166 264 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 PRRX1P54821 245 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 MFAP2P55001 183 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 ZNF841Q6ZN19 808 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 MMD2Q8IY49 270 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 TEX45Q8NA69 505 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 PAXXQ9BUH6 204 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 CLEC7AQ9BXN2 247 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 IGHV1-3A0A0C4DH29 117 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 IGLV1-47P01700 117 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 GZMBP10144 247 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
CPSF6-201ENST00000266679 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 GBGT1Q8N5D6 347 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 TNFRSF14Q92956 283 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
CPSF6-201ENST00000266679 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
CPSF6-201ENST00000266679 MALRD1Q5VYJ5 2156 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 TRAV9-1A0A075B6T8 112 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 PPIAL4CA0A0B4J2A2 164 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 C22orf46C9J442 243 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 FRMD6-AS1P0C7T7 363 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 IER3P46695 156 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 ZNF672Q499Z4 452 aaPredicted RBP10.33□□□□□ -0.76
CPSF6-201ENST00000266679 MRPL41Q8IXM3 137 aaKnown RBP10.33□□□□□ -0.76
CPSF6-201ENST00000266679 CELSR1Q9NYQ6 3014 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 SPINK4O60575 86 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 LY6HO94772 140 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 IGLV2-8P01709 118 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 CRYGBP07316 175 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 TCL1AP56279 114 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 CDSNQ15517 529 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 TNFRSF19Q9NS68 423 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 SIGLEC9Q9Y336 463 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 POLQO75417 2590 aa10.33□□□□□ -0.76
CPSF6-201ENST00000266679 ZNF705GA8MUZ8 300 aaPredicted RBP10.32□□□□□ -0.76
CPSF6-201ENST00000266679 GCGP01275 180 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 ORM2P19652 201 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 SELENOTP62341 195 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 RPEQ96AT9 228 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
CPSF6-201ENST00000266679 NUPR1O60356 82 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms