RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 FOLR2P14207 255 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 CFPP27918 469 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 CEACAM8P31997 349 aaPredicted RBP12.68□□□□□ -0.38
TIMP3-201ENST00000266085 TCTAP57738 103 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 GCSAMLQ5JQS6 135 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 KIR2DL4Q99706 377 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 CBY3A6NI87 242 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 CEACAM4O75871 244 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 TDGF1P13385 188 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 ZNF56Q15929 161 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 SLC25A48Q6ZT89 311 aaKnown RBP12.67□□□□□ -0.38
TIMP3-201ENST00000266085 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 M0R381 172 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 PYYP10082 97 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 OTORQ9NRC9 128 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
TIMP3-201ENST00000266085 IGHV1-3A0A0C4DH29 117 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 OOSP1A8MZH6 123 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 TMEM136Q6ZRR5 245 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 ATG101Q9BSB4 218 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
TIMP3-201ENST00000266085 FBLL1A6NHQ2 334 aaKnown RBP12.66□□□□□ -0.38
TIMP3-201ENST00000266085 LINC00473A8K010 186 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 C9JCJ5 164 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 DSCR9P59020 149 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 LINC00205P59089 165 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 KLK15Q9H2R5 256 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 WNT2P09544 360 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 MYOD1P15172 320 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 PIEZO2Q9H5I5 2752 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
TIMP3-201ENST00000266085 Q6AWC8 147 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 TMEM167AQ8TBQ9 72 aa12.66□□□□□ -0.38
TIMP3-201ENST00000266085 KIF26AQ9ULI4 1882 aaPredicted RBP12.66□□□□□ -0.38
TIMP3-201ENST00000266085 C5orf52A6NGY3 159 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 RSPO1Q2MKA7 263 aaPredicted RBP12.65□□□□□ -0.38
TIMP3-201ENST00000266085 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 TMEM14EPQ6UXP3 125 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 RNF5Q99942 180 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 E9PQ18 207 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 ZNF324O75467 553 aaPredicted RBP12.65□□□□□ -0.38
TIMP3-201ENST00000266085 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.38
TIMP3-201ENST00000266085 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 B4DSR2 109 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 TMEM219Q86XT9 240 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 DCAF16Q9NXF7 216 aa12.65□□□□□ -0.38
TIMP3-201ENST00000266085 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 AREGP15514 252 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 ASIPP42127 132 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 TPTE2P1Q5T6R2 138 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 CYTL1Q9NRR1 136 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 EPDR1Q9UM22 224 aa12.65□□□□□ -0.39
TIMP3-201ENST00000266085 C2orf16Q68DN1 1984 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 A0A1W2PRX2 142 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 TMEM183AQ8IXX5 376 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 TMEM70Q9BUB7 260 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 MBNL3Q9NUK0 354 aaKnown RBP12.64□□□□□ -0.39
TIMP3-201ENST00000266085 SOX21Q9Y651 276 aaPredicted RBP12.64□□□□□ -0.39
TIMP3-201ENST00000266085 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 C19orf54Q5BKX5 351 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 Q6ZR03 302 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 TRAV3A0A0B4J244 114 aa12.64□□□□□ -0.39
TIMP3-201ENST00000266085 TRAV9-1A0A075B6T8 112 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 GNG5P63218 68 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 HIGD1CA8MV81 97 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 UBE2L6O14933 153 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 C1orf147Q96MC9 270 aaPredicted RBP12.63□□□□□ -0.39
TIMP3-201ENST00000266085 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 MUC21Q5SSG8 566 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 RPP25LQ8N5L8 163 aaKnown RBP12.63□□□□□ -0.39
TIMP3-201ENST00000266085 ITLN2Q8WWU7 325 aaPredicted RBP12.63□□□□□ -0.39
TIMP3-201ENST00000266085 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
TIMP3-201ENST00000266085 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 H0YJW9 148 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 MOB4Q9Y3A3 225 aa12.63□□□□□ -0.39
TIMP3-201ENST00000266085 M0R1W7 72 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 UQCR10Q9UDW1 63 aa12.62□□□□□ -0.39
TIMP3-201ENST00000266085 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms