RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 MRPS18CQ9Y3D5 142 aaKnown RBP4.58□□□□□ -1.68
XRN1-201ENST00000264951 IGHV3OR16-12A0A075B7B8 117 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 TRAV13-2A0A0B4J235 113 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 REG1AP05451 166 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 PMS2CLQ68D20 193 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 CENPVQ7Z7K6 275 aaPredicted RBP4.58□□□□□ -1.68
XRN1-201ENST00000264951 OR13A1Q8NGR1 328 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 UCN2Q96RP3 112 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 TRGV9Q99603 122 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 FBXL15Q9H469 300 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 C9orf118A6NHY6 69 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 ATOX1O00244 68 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 COX6B1P14854 86 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 TPRX1Q8N7U7 411 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 FOXQ1Q9C009 403 aa4.58□□□□□ -1.68
XRN1-201ENST00000264951 CGB1A6NKQ9 187 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGFBP2P18065 325 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 ST6GALNAC6Q969X2 333 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 AKAP11Q9UKA4 1901 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 WISP3O95389 354 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 ST6GALNAC3Q8NDV1 305 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 C18orf12Q96KH6 178 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 SDK2Q58EX2 2172 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGHV3-21A0A0B4J1V1 117 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 A0A1W2PQF6 199 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGLV3-21P80748 117 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 IL15RAQ13261 267 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 ZNF385AQ96PM9 386 aaKnown RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 CCL21O00585 134 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 EGR2P11161 476 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 APOBEC3AP31941 199 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 LAMB2P55268 1798 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 ABCA3Q99758 1704 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 TRGV4A0A0C4DH28 118 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 C12orf77C9JDV5 145 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 SNAI2O43623 268 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 SAA1P0DJI8 122 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGKV1D-42A0A075B6H8 117 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGHV1OR15-9A0A0B4J2B8 117 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 A8MWP6 167 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 VEGFBP49765 207 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 LINC01590Q5TEZ4 76 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 IGHV3OR15-7A0A075B7D8 119 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 K7EP34 96 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 ERCC8Q13216 396 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 SS18Q15532 418 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 MPV17L2Q567V2 206 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 LINC01551Q86U37 167 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 C1QTNF5Q9BXJ0 243 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 R3HDMLQ9H3Y0 253 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 TP53BP1Q12888 1972 aaPredicted RBP4.57□□□□□ -1.68
XRN1-201ENST00000264951 STRCQ7RTU9 1775 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 C6orf226Q5I0X4 101 aa4.57□□□□□ -1.68
XRN1-201ENST00000264951 LILRA1O75019 489 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 C1orf53Q5VUE5 145 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 CDK5RAP2Q96SN8 1893 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 PIN1P1O15428 100 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 EFNB3Q15768 340 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 DSCR8Q96T75 97 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 FOXA2Q9Y261 457 aaPredicted RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 MYO18BQ8IUG5 2567 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 C9JAW5 83 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 RNASE4P34096 147 aaKnown RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 DRD3P35462 400 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 PRSS41Q7RTY9 318 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 H0YIZ8 118 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 RBM3P98179 157 aaKnown RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 MRPL14Q6P1L8 145 aaKnown RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 GAGE12HA6NDE8 117 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 ZNF138P52744 262 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 ZC2HC1BQ5TFG8 222 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 CTHRC1Q96CG8 243 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 RTBDNQ9BSG5 229 aaPredicted RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 REPIN1Q9BWE0 567 aaKnown RBP4.56□□□□□ -1.68
XRN1-201ENST00000264951 K7EP13 123 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 TRAV14DV4A0A0A6YYC5 116 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 A0A1W2PPE3 182 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 APELAP0DMC3 54 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 STHQ8IWL8 128 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 MPDZO75970 2070 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 Q6ZVH6 145 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
XRN1-201ENST00000264951 FOXS1O43638 330 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 MP68P56378 58 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 RNASE7Q9H1E1 156 aaKnown RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 FAM60AQ9NP50 221 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 KNCNA6PVL3 124 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 PDE6GP18545 87 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 MIR17HGQ75NE6 70 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 ANKRD29Q8N6D5 301 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 USMG5Q96IX5 58 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 PRSS22Q9GZN4 317 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 XIRP1Q702N8 1843 aaKnown RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 DOCK2Q92608 1830 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 BVES-AS1Q5T3Y7 98 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 RMI2Q96E14 147 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms