RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 C1QL4Q86Z23 238 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 TRAV3A0A0B4J244 114 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 PCNX2A6NKB5 2137 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 CEACAM4O75871 244 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 NDUFAF3Q9BU61 184 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
CDH3-201ENST00000264012 TMEM14EPQ6UXP3 125 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 EPDR1Q9UM22 224 aa11.52□□□□□ -0.57
CDH3-201ENST00000264012 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 ASIPP42127 132 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 SOX21Q9Y651 276 aaPredicted RBP11.51□□□□□ -0.57
CDH3-201ENST00000264012 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 IGHV1-3A0A0C4DH29 117 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 GNLYP22749 145 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
CDH3-201ENST00000264012 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 UNQ6494/PRO21346Q6UXR6 183 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 ST6GALNAC3Q8NDV1 305 aa11.51□□□□□ -0.57
CDH3-201ENST00000264012 ZNF418Q8TF45 676 aaPredicted RBP11.51□□□□□ -0.57
CDH3-201ENST00000264012 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 UBE2L6O14933 153 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 LINC00205P59089 165 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 Q6AWC8 147 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 IZUMO1RA6ND01 250 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 KLRD1Q13241 179 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 SLX1AQ9BQ83 275 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
CDH3-201ENST00000264012 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
CDH3-201ENST00000264012 A0A1B0GW64 132 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 SOD3P08294 240 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 STAG3L2P0CL84 134 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 STAG3L3P0CL85 134 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 NEUROG1Q92886 237 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 TMEM242Q9NWH2 141 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 TPTE2P1Q5T6R2 138 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 C1orf147Q96MC9 270 aaPredicted RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 C7orf71A4D174 169 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 H0YJW9 148 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 UQCRFS1P47985 274 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 PCP4P48539 62 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 PRR30Q53SZ7 412 aaPredicted RBP11.49□□□□□ -0.57
CDH3-201ENST00000264012 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
CDH3-201ENST00000264012 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 K7ENP7 123 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
CDH3-201ENST00000264012 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
CDH3-201ENST00000264012 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 OSTCQ9NRP0 149 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 A0A1B0GW15 77 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 LY6HO94772 140 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
CDH3-201ENST00000264012 WNT2P09544 360 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 JOSD1Q15040 202 aaPredicted RBP11.48□□□□□ -0.57
CDH3-201ENST00000264012 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 C8orf46Q8TAG6 207 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 TMEM170AQ8WVE7 144 aa11.48□□□□□ -0.57
CDH3-201ENST00000264012 ITLN2Q8WWU7 325 aaPredicted RBP11.48□□□□□ -0.57
CDH3-201ENST00000264012 GAGE10A6NGK3 116 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 MYOD1P15172 320 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 Q6ZRM9 215 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms