RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 TMED6Q8WW62 240 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CHRDL1Q9BU40 450 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 NPCDR1Q9BY65 106 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ARV1Q9H2C2 271 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC25A32Q9H2D1 315 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 GNB4Q9HAV0 340 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 H3BUA1 57 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 AGPAT2O15120 278 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CLN5O75503 358 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 SCAF4O95104 1147 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CLEC3BP05452 202 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 IGLC1P0CG04 106 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CD28P10747 220 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 C4BPBP20851 252 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 GPR183P32249 361 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CAMLGP49069 296 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 FOXE3Q13461 319 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 FAM74A1Q5RGS3 127 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ZNF491Q8N8L2 437 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 THAP8Q8NA92 274 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 STOML3Q8TAV4 291 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 VN1R17PQ8TDU5 208 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 SLA2Q9H6Q3 261 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 CLPSL1A2RUU4 121 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 FNDC10F2Z333 226 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 GNG7O60262 68 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 BRI3O95415 125 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 IGKV1-17P01599 117 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 ELANEP08246 267 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 CTSGP08311 255 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 ADMP35318 185 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 ELLP55199 621 aaPredicted RBP7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 GCSAMLQ5JQS6 135 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 BPIFCQ8NFQ6 507 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 OR4X2Q8NGF9 303 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 OR4F5Q8NH21 305 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 PCNPQ8WW12 178 aaKnown RBP7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 CXorf58Q96LI9 332 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 GGTLC1Q9BX51 225 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
SNRNP40-201ENST00000263694 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 TCRBV4S1A1TA0A5B7 111 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 LINC00869P0C866 280 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 SPP1P10451 314 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 NPBWR1P48145 328 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 PROK1P58294 105 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 KHDC1LQ5JSQ8 128 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 TEX261Q6UWH6 196 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 CYP2G1PQ6ZSU1 146 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 RNF152Q8N8N0 203 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF680Q8NEM1 530 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 OR2G3Q8NGZ4 309 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF414Q96IQ9 312 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 USMG5Q96IX5 58 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 TENM1Q9UKZ4 2725 aa7.52□□□□□ -1.21
SNRNP40-201ENST00000263694 TRBV7-1A0A0A6YYK4 115 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 YIF1AO95070 293 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 FHITP49789 147 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 DEFB136Q30KP8 78 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 FFAR4Q5NUL3 377 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 STPG3Q8N7X2 389 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF709Q8N972 641 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 MYOZ3Q8TDC0 251 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 TRGV9Q99603 122 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 DOK5Q9P104 306 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 WNK1Q9H4A3 2382 aa7.51□□□□□ -1.21
SNRNP40-201ENST00000263694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 MPDU1O75352 247 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 OR2C1O95371 312 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 PSG1P11464 419 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 ARL3P36405 182 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 RAB2AP61019 212 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 EIF5AP63241 154 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 RAB31Q13636 194 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 KRTAP24-1Q3LI83 254 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 GNPNAT1Q96EK6 184 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 DUX3Q96PT4 197 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 TXN2Q99757 166 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 SLC39A9Q9NUM3 307 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 C17orf112F2Z3M2 114 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms