RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 CIDEAO60543 219 aa11.76□□□□□ -0.53
FOXF1-201ENST00000262426 C3orf79P0CE67 100 aa11.76□□□□□ -0.53
FOXF1-201ENST00000262426 FXYD3Q14802 87 aa11.76□□□□□ -0.53
FOXF1-201ENST00000262426 WFDC12Q8WWY7 111 aa11.76□□□□□ -0.53
FOXF1-201ENST00000262426 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.76□□□□□ -0.53
FOXF1-201ENST00000262426 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
FOXF1-201ENST00000262426 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 ZNF253O75346 499 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 LINC01551Q86U37 167 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 SRRM4A7MD48 611 aaKnown RBP11.75□□□□□ -0.53
FOXF1-201ENST00000262426 PMCHL1Q16048 86 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
FOXF1-201ENST00000262426 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
FOXF1-201ENST00000262426 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
FOXF1-201ENST00000262426 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 OR8I2Q8N0Y5 310 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 TMEM140Q9NV12 185 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 ARL2-SNX15V9GYD0 113 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
FOXF1-201ENST00000262426 NUDT3O95989 172 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 P0C879 139 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 COX7A1P24310 79 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 MRPL20Q9BYC9 149 aaKnown RBP11.74□□□□□ -0.53
FOXF1-201ENST00000262426 FBLL1A6NHQ2 334 aaKnown RBP11.74□□□□□ -0.53
FOXF1-201ENST00000262426 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
FOXF1-201ENST00000262426 GNB1P62873 340 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 SSX8Q7RTT4 187 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 P2RX4Q99571 388 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
FOXF1-201ENST00000262426 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SEPSECSQ9HD40 501 aaKnown RBP11.73□□□□□ -0.53
FOXF1-201ENST00000262426 MUC21A0A0G2JKD1 596 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 MUC21A0A140T8X8 626 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 MUC21Q5SSG8 566 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
FOXF1-201ENST00000262426 CORO2AQ92828 525 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
FOXF1-201ENST00000262426 HSPB7Q9UBY9 170 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SRIP30626 198 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SP5Q6BEB4 398 aaPredicted RBP11.73□□□□□ -0.53
FOXF1-201ENST00000262426 BORCS7Q96B45 105 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 BBC3Q96PG8 261 aaPredicted RBP11.73□□□□□ -0.53
FOXF1-201ENST00000262426 PMCHL2Q9BQD1 86 aa11.73□□□□□ -0.53
FOXF1-201ENST00000262426 GAGE12BA1L429 117 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 NIT1Q86X76 327 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 DDB2Q92466 427 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 GPX1P07203 203 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 SLC25A6P12236 298 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 TAF15Q92804 592 aaKnown RBP eCLIP11.72□□□□□ -0.53
FOXF1-201ENST00000262426 RITA1Q96K30 269 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 SERTAD4Q9NUC0 356 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 ERVK-16P61578 105 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 Q8N976 141 aa11.72□□□□□ -0.53
FOXF1-201ENST00000262426 ABCA12Q86UK0 2595 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 TRBV20OR9-2A0A075B6H5 130 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 APELAP0DMC3 54 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 CD99P14209 185 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 ARF6P62330 175 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 OR1N2Q8NGR9 330 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 RAB1BQ9H0U4 201 aa11.71□□□□□ -0.53
FOXF1-201ENST00000262426 HEYLQ9NQ87 328 aaPredicted RBP11.71□□□□□ -0.53
FOXF1-201ENST00000262426 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.53
FOXF1-201ENST00000262426 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
FOXF1-201ENST00000262426 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.54
FOXF1-201ENST00000262426 HSBP1L1C9JCN9 74 aa11.71□□□□□ -0.54
FOXF1-201ENST00000262426 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.54
FOXF1-201ENST00000262426 GATA2P23769 480 aaPredicted RBP11.71□□□□□ -0.54
FOXF1-201ENST00000262426 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.54
FOXF1-201ENST00000262426 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.54
FOXF1-201ENST00000262426 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
FOXF1-201ENST00000262426 RRHO14718 337 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 ENSAO43768 121 aaKnown RBP11.7□□□□□ -0.54
FOXF1-201ENST00000262426 PPBPP02775 128 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
FOXF1-201ENST00000262426 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 CTRLP40313 264 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 PRRX1P54821 245 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
FOXF1-201ENST00000262426 CLEC7AQ9BXN2 247 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms