RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 AMY1AP04745 511 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 CXorf66Q5JRM2 361 aaPredicted RBP21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 TAF15Q92804 592 aaKnown RBP eCLIP21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 PPP1R27Q86WC6 154 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 TEX45Q8NA69 505 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 OR4A16Q8NH70 328 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 TMEM167AQ8TBQ9 72 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 RNASE8Q8TDE3 154 aaKnown RBP21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 C20orf144Q9BQM9 153 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 DNAJC4Q9NNZ3 241 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 VPREB3Q9UKI3 123 aa21.81■■□□□ 1.08
SMARCD3-201ENST00000262188 C20orf202A1L168 122 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 DNAJC9-AS1A6NH13 148 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 E7EUB6 86 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 SCGB1D2O95969 90 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 OR13C7P0DN81 318 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 SSBP2P81877 361 aaPredicted RBP21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 SLC25A24Q6NUK1 477 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 OR2D3Q8NGH3 330 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 ORAOV1Q8WV07 137 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 GINS3Q9BRX5 216 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 MOB4Q9Y3A3 225 aa21.8■■□□□ 1.08
SMARCD3-201ENST00000262188 CA2P00918 260 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 OR10J1P30954 320 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 PRSS8Q16651 343 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 C5orf56Q8N8D9 126 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 MAGT1Q9H0U3 335 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 A0A1B0GU03 582 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 ST8SIA3O43173 380 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 CRLF1O75462 422 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 ZNF616Q08AN1 781 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 PNRC1Q12796 327 aaPredicted RBP21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 Q6ZS46 218 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 NUDT10Q8NFP7 164 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 VSTM2AQ8TAG5 236 aa21.79■■□□□ 1.08
SMARCD3-201ENST00000262188 C15orf61A6NNL5 157 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 PITX3O75364 302 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 RPL8P62917 257 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 BLCAPP62952 87 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 SRSF2Q01130 221 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 TNXAQ16473 311 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 ZNF343Q6P1L6 599 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 TEX38Q6PEX7 206 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 OR4D5Q8NGN0 318 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 OR10G4Q8NGN3 311 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 HSPB9Q9BQS6 159 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 MIEN1Q9BRT3 115 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 ZNF727A8MUV8 499 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 APELAP0DMC3 54 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 RPL12P30050 165 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 NIPSNAP3BQ9BS92 247 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 SRD5A3Q9H8P0 318 aa21.78■■□□□ 1.08
SMARCD3-201ENST00000262188 ETFRF1Q6IPR1 90 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 RASL11BQ9BPW5 248 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 HINT2Q9BX68 163 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 TMEM14BQ9NUH8 114 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 C1RLQ9NZP8 487 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 OR51B2Q9Y5P1 312 aa21.77■■□□□ 1.08
SMARCD3-201ENST00000262188 LINC01548A6NM66 108 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 CLDN34H7C241 214 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 HSPB1P04792 205 aaKnown RBP21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 NDPQ00604 133 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 SPIN2AQ99865 258 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 SPIN2BQ9BPZ2 258 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 FAM103A1Q9BTL3 118 aaKnown RBP21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 FBXL17Q9UF56 701 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 OR5I1Q13606 314 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 ATP6V1FQ16864 119 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 MRPL41Q8IXM3 137 aaKnown RBP21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 CTDSP1Q9GZU7 261 aa21.76■■□□□ 1.07
SMARCD3-201ENST00000262188 TEX50A0A1B0GTY4 177 aa21.75■■□□□ 1.07
SMARCD3-201ENST00000262188 MBPP02686 304 aaPredicted RBP21.75■■□□□ 1.07
SMARCD3-201ENST00000262188 FOXA2Q9Y261 457 aaPredicted RBP21.75■■□□□ 1.07
SMARCD3-201ENST00000262188 PIGBOS1A0A0B4J2F0 54 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 RBFOX3A6NFN3 312 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 CGB1A6NKQ9 187 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 RPL29P47914 159 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 RAB32Q13637 225 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 OR8G2PQ6IF36 304 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 ZNF429Q86V71 674 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 OR4A5Q8NH83 315 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 NF1P21359 2839 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 SLC25A6P12236 298 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 S100A10P60903 97 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 CX3CL1P78423 397 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 SCGB2A2Q13296 93 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 MMD2Q8IY49 270 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 OR10W1Q8NGF6 305 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 PRNDQ9UKY0 176 aa21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 LSM5Q9Y4Y9 91 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 NIPBLQ6KC79 2804 aaeCLIP21.74■■□□□ 1.07
SMARCD3-201ENST00000262188 IGHV7-81A0A0B4J1V7 117 aa21.73■■□□□ 1.07
SMARCD3-201ENST00000262188 GPR137BO60478 399 aa21.73■■□□□ 1.07
SMARCD3-201ENST00000262188 ZNF418Q8TF45 676 aaPredicted RBP21.73■■□□□ 1.07
SMARCD3-201ENST00000262188 CNIH1O95406 144 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 SRP19P09132 144 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 NKX2-1P43699 371 aaPredicted RBP21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 P2RY1P47900 373 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 ZNF705AQ6ZN79 300 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms