RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 APOA2P02652 100 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 BMPR1BO00238 502 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 TNFSF4P23510 183 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 WFDC8Q8IUA0 241 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 HSBP1O75506 76 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 CD24P25063 80 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 DLX1P56177 255 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 SLAQ13239 276 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 MAJINQ3KP22 176 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 Q6ZN92 141 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 MOSP00540 346 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 LHBP01229 141 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 CD69Q07108 199 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 RPUSD1Q9UJJ7 312 aaKnown RBP11.74□□□□□ -0.53
SFSWAP-201ENST00000261674 hADV38S2A0JD32 116 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 Q0VG73 95 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 RNASEKQ6P5S7 137 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 FLYWCH2Q96CP2 140 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 SFXN3Q9BWM7 321 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 OSTCQ9NRP0 149 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 SLC25A10Q9UBX3 287 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 ISLRO14498 428 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 C3orf79P0CE67 100 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 UQCRFS1P47985 274 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 Q56UQ5 140 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 ANKHD1Q8IWZ3 2542 aaKnown RBP11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 A0A0G2JNJ9 132 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 A0A1W2PN81 502 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 SLC25A17O43808 307 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 AMY1AP04745 511 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 CFHR2P36980 270 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 UCNP55089 124 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 C1orf185Q5T7R7 199 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 OR1B1Q8NGR6 318 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 OR1L8Q8NGR8 309 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 C20orf144Q9BQM9 153 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 Q9UFV3 132 aa11.73□□□□□ -0.53
SFSWAP-201ENST00000261674 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 CORTO00230 105 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 GRNP28799 593 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 PPOXP50336 477 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 RNF2Q99496 336 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 MT-ND6P03923 174 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 KCNS1Q96KK3 526 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 SAP30LQ9HAJ7 183 aa11.72□□□□□ -0.53
SFSWAP-201ENST00000261674 M0QZK8 103 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 UBE2G1P62253 170 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 CDSNQ15517 529 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 FAM57AQ8TBR7 257 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 CCL21O00585 134 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 HNRNPA3P51991 378 aaKnown RBP11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 Q6ZVH6 145 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 TSKUQ8WUA8 353 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 MRPL36Q9P0J6 103 aaKnown RBP11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 USP9XQ93008 2570 aaPredicted RBP11.71□□□□□ -0.53
SFSWAP-201ENST00000261674 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 A0A1W2PRE2 83 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 H0Y8G0 127 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 M0QZ24 198 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 DLEU1O43261 78 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 PMCHL1Q16048 86 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 TNXAQ16473 311 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 C2orf83Q53S99 150 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 NUDT10Q8NFP7 164 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 OR5B3Q8NH48 314 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 NUDT11Q96G61 164 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.54
SFSWAP-201ENST00000261674 PGPA6NDG6 321 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms