RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ANGPTL7O43827 346 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BKO60814 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KRASP01116 189 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BJP06899 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SEC11BP0C7V7 166 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 P0DMU3 169 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FAM231AP0DMU4 169 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FAM231CP0DMU5 169 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BOP23527 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BBP33778 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 POLR2IP36954 125 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LPAR6P43657 344 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF83P51522 516 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 GFERP55789 205 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BDP58876 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 GABARAPL2P60520 117 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BCP62807 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ERCC8Q13216 396 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST2H2BEQ16778 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00303Q3SY05 128 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 Q5XG85 94 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 OR2T2Q6IF00 324 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 MORN3Q6PF18 240 aaPredicted RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 UNQ5815/PRO19632Q6UWF5 114 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LCN15Q6UWW0 184 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ZFP2Q6ZN57 461 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A26Q70HW3 274 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SSX8Q7RTT4 187 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ZDHHC22Q8N966 263 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 OR4C16Q8NGL9 310 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 TWIST2Q8WVJ9 160 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 RTN4IP1Q8WWV3 396 aaPredicted RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BHQ93079 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KCNS1Q96KK3 526 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SDF2Q99470 211 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SPIN2AQ99865 258 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BNQ99877 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BMQ99879 126 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SPIN2BQ9BPZ2 258 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 THTPAQ9BU02 230 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 CHAC1Q9BUX1 264 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SNRNP25Q9BV90 132 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 MRPL20Q9BYC9 149 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 DUSP21Q9H596 190 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 NPVFQ9HCQ7 196 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 TPRKBQ9Y3C4 175 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KDM5CP41229 1560 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 DOCK5Q9H7D0 1870 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 OTOFQ9HC10 1997 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 A2ML1A8K2U0 1454 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 CDK12Q9NYV4 1490 aaPredicted RBP2.67□□□□□ -1.98
CCDC54-201ENST00000261058 A0A1B0GUL6 1792 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 TRBV19A0A075B6N1 114 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 IGKV1-27A0A075B6S5 117 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 TRAV8-1A0A0A6YYK1 113 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 A0A1W2PP18 115 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 IGLC7A0M8Q6 106 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 HMSDA8MTL9 139 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM262E9PQX1 116 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 J3QQQ9 107 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 KLF7O75840 302 aaPredicted RBP2.67□□□□□ -1.98
CCDC54-201ENST00000261058 HLA-DRB1P01911 266 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 CTLA4P16410 223 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 PSMB8P28062 276 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 OPRK1P41145 380 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 ATP5G3P48201 142 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 ADIGQ0VDE8 80 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF141Q15928 474 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 TDRG1Q3Y452 100 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 FKBP1CQ5VVH2 108 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 AMTNQ6UX39 209 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM14EPQ6UXP3 125 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 OR5D16Q8NGK9 328 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A40Q8TBP6 338 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A44Q96H78 314 aaPredicted RBP2.67□□□□□ -1.98
CCDC54-201ENST00000261058 IMMP2LQ96T52 175 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 LINC01587Q99440 93 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 NAA38Q9BRA0 125 aaKnown RBP2.67□□□□□ -1.98
CCDC54-201ENST00000261058 RTL8AQ9BWD3 113 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 RPP21Q9H633 154 aaKnown RBP2.67□□□□□ -1.98
CCDC54-201ENST00000261058 RBM12B-AS1Q9P1G2 102 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
CCDC54-201ENST00000261058 ABCC3O15438 1527 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 ABCC2Q92887 1545 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TRIP11Q15643 1979 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 FRMPD1Q5SYB0 1578 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TECPR2O15040 1411 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TRGV10A0A0A0MS01 117 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 CCL15-CCL14A0A0B4J2E2 113 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 IGHV3-66A0A0C4DH42 116 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TRDV1A0A1B0GX56 115 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 C7orf66A4D0T2 115 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 F8W1H4 67 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 K7EP34 96 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 PIRO00625 290 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 ISLRO14498 428 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms