RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 RND2P52198 227 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
CGREF1-201ENST00000260595 TMEM187Q14656 261 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 TRPT1Q86TN4 253 aaKnown RBP12.31□□□□□ -0.44
CGREF1-201ENST00000260595 SLC24A4Q8NFF2 622 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 RNASEH2CQ8TDP1 164 aaKnown RBP12.31□□□□□ -0.44
CGREF1-201ENST00000260595 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 PRRT1Q99946 306 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 CCDC59Q9P031 241 aaKnown RBP12.31□□□□□ -0.44
CGREF1-201ENST00000260595 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
CGREF1-201ENST00000260595 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
CGREF1-201ENST00000260595 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 NXPH3O95157 252 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
CGREF1-201ENST00000260595 NMSQ5H8A3 153 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 STHQ8IWL8 128 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 OR1S2Q8NGQ3 325 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 C11orf45Q8TAV5 145 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 RAB2BQ8WUD1 216 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 IL22RA2Q969J5 263 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 SOSTQ9BQB4 213 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
CGREF1-201ENST00000260595 DEFB4AO15263 64 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 OR10J1P30954 320 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 TMBIM6P55061 237 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 C16orf54Q6UWD8 224 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 Q8WTZ3 238 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
CGREF1-201ENST00000260595 KMT2AQ03164 3969 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 HNRNPCP07910 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 SULT1A3P0DMM9 295 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 SULT1A4P0DMN0 295 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 SUPT4H1P63272 117 aaKnown RBP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 USF2Q15853 346 aaPredicted RBP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 Q8NAQ8 132 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 NARS2Q96I59 477 aaKnown RBP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 BCL7BQ9BQE9 202 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 SLIRPQ9GZT3 109 aaKnown RBP12.28□□□□□ -0.44
CGREF1-201ENST00000260595 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 KCNIP3Q9Y2W7 256 aa12.28□□□□□ -0.44
CGREF1-201ENST00000260595 C4BPBP20851 252 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 NPY1RP25929 384 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 ETFRF1Q6IPR1 90 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 FBXL17Q9UF56 701 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 RSL24D1Q9UHA3 163 aaKnown RBP12.27□□□□□ -0.45
CGREF1-201ENST00000260595 SCP2D1Q9UJQ7 156 aa12.27□□□□□ -0.45
CGREF1-201ENST00000260595 A0A0B4J2A0 478 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 HELTA6NFD8 242 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 RBMY1A1P0DJD3 496 aaKnown RBP12.26□□□□□ -0.45
CGREF1-201ENST00000260595 RBMY1CP0DJD4 496 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 SPP1P10451 314 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 TNFSF8P32971 234 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 CCR6P51684 374 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 RBMY1FQ15415 496 aaKnown RBP12.26□□□□□ -0.45
CGREF1-201ENST00000260595 TMEM41BQ5BJD5 291 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 MORN3Q6PF18 240 aaPredicted RBP12.26□□□□□ -0.45
CGREF1-201ENST00000260595 LYZL2Q7Z4W2 148 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 SHPKQ9UHJ6 478 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 U3KQ87 197 aa12.26□□□□□ -0.45
CGREF1-201ENST00000260595 ZNF705EA8MWA4 302 aaPredicted RBP12.25□□□□□ -0.45
CGREF1-201ENST00000260595 BUB3O43684 328 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 DEDDO75618 318 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 TOMM40O96008 361 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 IL4P05112 153 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 AP2S1P53680 142 aaPredicted RBP12.25□□□□□ -0.45
CGREF1-201ENST00000260595 DHRS2Q13268 280 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 SMCO1Q147U7 214 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 ACTL10Q5JWF8 245 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 NOXA1Q86UR1 476 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 ACY3Q96HD9 319 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 SCGB3A2Q96PL1 93 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 RAB40CQ96S21 281 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 RBKSQ9H477 322 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 X6R8D5 127 aa12.25□□□□□ -0.45
CGREF1-201ENST00000260595 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 FABP12A6NFH5 140 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 H3BMQ9 156 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 IFNA10P01566 189 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 IFNA4P05014 189 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 PSG1P11464 419 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 AKR1C4P17516 323 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
CGREF1-201ENST00000260595 PSMG4Q5JS54 123 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 HRH4Q9H3N8 390 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 MCUBQ9NWR8 336 aa12.24□□□□□ -0.45
CGREF1-201ENST00000260595 MIFP14174 115 aa12.23□□□□□ -0.45
CGREF1-201ENST00000260595 LGI3Q8N145 548 aa12.23□□□□□ -0.45
CGREF1-201ENST00000260595 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
CGREF1-201ENST00000260595 AGRNO00468 2067 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms