RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 SMCO3A2RU48 225 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 CLEC3BP05452 202 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 CXCL2P19875 107 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 GPR183P32249 361 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 Q56UQ5 140 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 MDFIQ99750 246 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 MED9Q9NWA0 146 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 FBXL17Q9UF56 701 aa12.2□□□□□ -0.46
CCDC90B-201ENST00000260054 IGKV1OR2-108A0A075B7D4 117 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 OR2T8A6NH00 312 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 CLN5O75503 358 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 NPBWR1P48145 328 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 C8orf86Q6ZUL3 223 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 TXN2Q99757 166 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 TMEM147Q9BVK8 224 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 WFDC1Q9HC57 220 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 NUDT19A8MXV4 375 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 PPP5D1E7EU14 171 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 GNG7O60262 68 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 OR2F1Q13607 317 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 ZNF345Q14585 488 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 DEFB136Q30KP8 78 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 TREML4Q6UXN2 200 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 NDUFA11Q86Y39 141 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 ATP6V0BQ99437 205 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 PEF1Q9UBV8 284 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
CCDC90B-201ENST00000260054 IGKV1D-37A0A075B6S9 117 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 CTSGP08311 255 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 IGLC1P0CG04 106 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 ADMP35318 185 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 RUNX1Q01196 453 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 NSUN5P1Q3KNT7 163 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 KCNRGQ8N5I3 272 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 ATP5SQ99766 215 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 CHRDL1Q9BU40 450 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
CCDC90B-201ENST00000260054 STAB1Q9NY15 2570 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 A0A087WW49 117 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 UBE2L5PA0A1B0GUS4 154 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 BMPR1BO00238 502 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 TGOLN2O43493 480 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 ZP3P21754 424 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 OR10J1P30954 320 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 ARL3P36405 182 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 OPCMLQ14982 345 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 C3orf56Q8N813 242 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
CCDC90B-201ENST00000260054 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 THAP8Q8NA92 274 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 WDR83OSQ9Y284 106 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 LSM4Q9Y4Z0 139 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 A0A0D9SG52 128 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 NUPL2O15504 423 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 DFFBO76075 338 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 TIGITQ495A1 244 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 OR11H1Q8NG94 326 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 ZNF414Q96IQ9 312 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
CCDC90B-201ENST00000260054 TRAV30A0A087WSZ9 112 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 IGHV3-35A0A0C4DH35 117 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 CFDP00746 253 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 ZNF90Q03938 601 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 OR1N2Q8NGR9 330 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 WDR61Q9GZS3 305 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
CCDC90B-201ENST00000260054 GGCTO75223 188 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 SCO1O75880 301 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 OR2C1O95371 312 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 FGF7P21781 194 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 TRGV9Q99603 122 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 MGST2Q99735 147 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
CCDC90B-201ENST00000260054 CCL24O00175 119 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 FHL3Q13643 280 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 RPL7L1Q6DKI1 246 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 SHISA2Q6UWI4 295 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 IQCF2Q8IXL9 164 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 LINC01619G3V211 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms