RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SDF2L1Q9HCN8 221 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 C1RLQ9NZP8 487 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 PRRC2AP48634 2157 aaKnown RBP21.93■■□□□ 1.1
CCM2-201ENST00000258781 NCBP2LA6PVI3 153 aaKnown RBP21.93■■□□□ 1.1
CCM2-201ENST00000258781 UBE2G2P60604 165 aa21.93■■□□□ 1.1
CCM2-201ENST00000258781 OR1L4Q8NGR5 311 aa21.93■■□□□ 1.1
CCM2-201ENST00000258781 ARL2-SNX15V9GYD0 113 aa21.93■■□□□ 1.1
CCM2-201ENST00000258781 F6UZH7 168 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 CST9LP1Q5W188 147 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 TMEM37Q8WXS4 190 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 DNAJC4Q9NNZ3 241 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 TNFRSF19Q9NS68 423 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 NAT8Q9UHE5 227 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 CREBBPQ92793 2442 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 ATF4P18848 351 aaPredicted RBP21.92■■□□□ 1.1
CCM2-201ENST00000258781 ZNF90Q03938 601 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 PQLC2Q6ZP29 291 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 PIP4P2Q8N4L2 257 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 MAPK1IP1LQ8NDC0 245 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 ARPC1AQ92747 370 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 TMEM167BQ9NRX6 74 aa21.92■■□□□ 1.1
CCM2-201ENST00000258781 ITPR3Q14573 2671 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 COLCA2A8K830 154 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 I3L2K1 104 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 ATP5G3P48201 142 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 BPIFB3P59826 476 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 CX3CL1P78423 397 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 RPUSD4Q96CM3 377 aaKnown RBP21.91■■□□□ 1.1
CCM2-201ENST00000258781 PARLQ9H300 379 aa21.91■■□□□ 1.1
CCM2-201ENST00000258781 RNF223E7ERA6 249 aa21.9■■□□□ 1.1
CCM2-201ENST00000258781 COX7A2P2O60397 106 aa21.9■■□□□ 1.1
CCM2-201ENST00000258781 NPIPB5A8MRT5 1133 aa21.9■■□□□ 1.1
CCM2-201ENST00000258781 C8orf88P0DMB2 117 aa21.9■■□□□ 1.1
CCM2-201ENST00000258781 RUSC1-AS1Q66K80 236 aa21.9■■□□□ 1.1
CCM2-201ENST00000258781 TMEM241Q24JQ0 296 aa21.89■■□□□ 1.09
CCM2-201ENST00000258781 FAM120AOSQ5T036 256 aa21.89■■□□□ 1.09
CCM2-201ENST00000258781 OR4X1Q8NH49 305 aa21.89■■□□□ 1.09
CCM2-201ENST00000258781 Q96MF0 132 aa21.89■■□□□ 1.09
CCM2-201ENST00000258781 IGHV1-69DA0A0B4J2H0 117 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 IGHV1-69P01742 117 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 MSMBP08118 114 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 ZNF674Q2M3X9 581 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 C10orf113Q5VZT2 155 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 Q8N9W7 124 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 FAM103A1Q9BTL3 118 aaKnown RBP21.88■■□□□ 1.09
CCM2-201ENST00000258781 PRSS57Q6UWY2 283 aa21.88■■□□□ 1.09
CCM2-201ENST00000258781 YTHDF2Q9Y5A9 579 aaKnown RBP21.88■■□□□ 1.09
CCM2-201ENST00000258781 HLA-DRB1P01911 266 aa21.87■■□□□ 1.09
CCM2-201ENST00000258781 NPPCP23582 126 aa21.87■■□□□ 1.09
CCM2-201ENST00000258781 ZNF503Q96F45 646 aa21.87■■□□□ 1.09
CCM2-201ENST00000258781 ELOA3CA0A087WX78 387 aaPredicted RBP21.86■■□□□ 1.09
CCM2-201ENST00000258781 IGHV3-21A0A0B4J1V1 117 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 OR2C1O95371 312 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 NDPQ00604 133 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 LOXL1Q08397 574 aaPredicted RBP21.86■■□□□ 1.09
CCM2-201ENST00000258781 B4DSR2 109 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 OR7C2O60412 319 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 ASPHD1Q5U4P2 390 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 PATE2Q6UY27 113 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 TTC9CQ8N5M4 171 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 ISOC2Q96AB3 205 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 FAM167A-AS1Q96KT0 104 aa21.86■■□□□ 1.09
CCM2-201ENST00000258781 K7EIM0 57 aa21.85■■□□□ 1.09
CCM2-201ENST00000258781 MT-ND4LP03901 98 aa21.85■■□□□ 1.09
CCM2-201ENST00000258781 HIST1H2BAQ96A08 127 aa21.85■■□□□ 1.09
CCM2-201ENST00000258781 SLC25A2Q9BXI2 301 aa21.85■■□□□ 1.09
CCM2-201ENST00000258781 DOK5Q9P104 306 aa21.85■■□□□ 1.09
CCM2-201ENST00000258781 CXorf65A6NEN9 183 aa21.84■■□□□ 1.09
CCM2-201ENST00000258781 OR51G1Q8NGK1 321 aa21.84■■□□□ 1.09
CCM2-201ENST00000258781 IGHV7-81A0A0B4J1V7 117 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 LOC105371267A0A1B0GV96 52 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 IGLC1P0CG04 106 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 PLP1P60201 277 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 KIAA0141Q14154 515 aaPredicted RBP21.83■■□□□ 1.09
CCM2-201ENST00000258781 WFDC11Q8NEX6 87 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 RASL11BQ9BPW5 248 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 TMEM242Q9NWH2 141 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 PRELID1Q9Y255 219 aa21.83■■□□□ 1.09
CCM2-201ENST00000258781 YPEL4Q96NS1 127 aa21.83■■□□□ 1.08
CCM2-201ENST00000258781 UHRF2Q96PU4 802 aa21.83■■□□□ 1.08
CCM2-201ENST00000258781 ZNF355PQ9NSJ1 428 aa21.83■■□□□ 1.08
CCM2-201ENST00000258781 HIF1ANQ9NWT6 349 aa21.83■■□□□ 1.08
CCM2-201ENST00000258781 IGLV11-55A0A075B6I3 123 aa21.82■■□□□ 1.08
CCM2-201ENST00000258781 TRAV40A0A0B4J280 105 aa21.82■■□□□ 1.08
CCM2-201ENST00000258781 RPL23P62829 140 aaKnown RBP21.82■■□□□ 1.08
CCM2-201ENST00000258781 MORN5Q5VZ52 161 aa21.82■■□□□ 1.08
CCM2-201ENST00000258781 FOLR2P14207 255 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 ADIRFQ15847 76 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 OR5AU1Q8NGC0 362 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 C11orf52Q96A22 123 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 NDUFB4O95168 129 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 LINC01356Q8N9X3 169 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 RBM14Q96PK6 669 aaKnown RBP21.81■■□□□ 1.08
CCM2-201ENST00000258781 CTDSP1Q9GZU7 261 aa21.81■■□□□ 1.08
CCM2-201ENST00000258781 FLNAP21333 2647 aaKnown RBP21.81■■□□□ 1.08
CCM2-201ENST00000258781 ABCA1O95477 2261 aa21.8■■□□□ 1.08
CCM2-201ENST00000258781 FABP1P07148 127 aa21.8■■□□□ 1.08
CCM2-201ENST00000258781 EGR2P11161 476 aaPredicted RBP21.8■■□□□ 1.08
CCM2-201ENST00000258781 RNF212Q495C1 297 aa21.8■■□□□ 1.08
CCM2-201ENST00000258781 FAM24BQ8N5W8 94 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms