RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GNB1LQ9BYB4 327 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 YPEL1O60688 119 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 IGLC2P0DOY2 106 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 IGLC3P0DOY3 106 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 CA7P43166 264 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
USHBP1-201ENST00000252597 PLGLAQ15195 96 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 LINC00305Q7Z4B0 112 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 NUP35Q8NFH5 326 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 NUDT10Q8NFP7 164 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 NUDT11Q96G61 164 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 YPEL2Q96QA6 119 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 SERTM2A0A1B0GWG4 89 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 ZNF883P0CG24 379 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 AREGP15514 252 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 PAX1P15863 534 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 UQCRFS1P47985 274 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 C18orf32Q8TCD1 76 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 SARAFQ96BY9 339 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
USHBP1-201ENST00000252597 KBTBD11-OT1A0A1B0GTJ5 212 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 hADV38S2A0JD32 116 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 SRRM5B3KS81 715 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 PDPNQ86YL7 162 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 ZNF503Q96F45 646 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 NUDT3O95989 172 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 LYZP61626 148 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 SELENOTP62341 195 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 TMEM177Q53S58 311 aa9.75□□□□□ -0.85
USHBP1-201ENST00000252597 RNASE8Q8TDE3 154 aaKnown RBP9.75□□□□□ -0.85
USHBP1-201ENST00000252597 ZNF292O60281 2723 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 MT-ND6P03923 174 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 COMPP49747 757 aaPredicted RBP9.74□□□□□ -0.85
USHBP1-201ENST00000252597 PRRX1P54821 245 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 PRNTQ86SH4 94 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 SPACA3Q8IXA5 215 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 OR8B3Q8NGG8 313 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 SFXN3Q9BWM7 321 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 RNF7Q9UBF6 113 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 ZFP30Q9Y2G7 519 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 DSCAMO60469 2012 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 CREBBPQ92793 2442 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 CCL25O15444 150 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 IGLL1P15814 213 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 WT1P19544 449 aaPredicted RBP9.74□□□□□ -0.85
USHBP1-201ENST00000252597 TBR1Q16650 682 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 NIT1Q86X76 327 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 MUC15Q8N387 334 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 TMEM116Q8NCL8 245 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 TNRC6AQ8NDV7 1962 aaKnown RBP9.74□□□□□ -0.85
USHBP1-201ENST00000252597 OR4C46A6NHA9 309 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 PEX7O00628 323 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 IGKV3-15P01624 115 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 RBP4P02753 201 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 CT45A6P0DMU7 189 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 CT45A5P0DMU8 189 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 CT45A7P0DMV0 189 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 TSPOP30536 169 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 EBLN2Q6P2I7 272 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 WFDC3Q8IUB2 231 aa9.74□□□□□ -0.85
USHBP1-201ENST00000252597 PRR33A8MZF0 331 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 C9JCJ5 164 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 FAM87AP0C7U9 286 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PRR20EP86478 221 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PRR20CP86479 221 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PRR20DP86480 221 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PRR20BP86481 221 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PRR20AP86496 221 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 MZT1Q08AG7 82 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 TPSG1Q9NRR2 321 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 PCSK5Q92824 1860 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 UPK2O00526 184 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 P01737 135 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 TMEM11P17152 192 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 COX7A1P24310 79 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 COL8A1P27658 744 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 Q0VG73 95 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 ZNF738Q8NE65 137 aa9.73□□□□□ -0.85
USHBP1-201ENST00000252597 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
USHBP1-201ENST00000252597 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 IZUMO1RA6ND01 250 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 HTR1DP28221 377 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 PPOXP50336 477 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 OR1L8Q8NGR8 309 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 LOXL4Q96JB6 756 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 TNFSF4P23510 183 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 CD69Q07108 199 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms