RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
APOBEC3A-201ENST00000249116 ODF3L2Q3SX64 289 aa9.57□□□□□ -0.88
APOBEC3A-201ENST00000249116 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
APOBEC3A-201ENST00000249116 TMEM217Q8N7C4 229 aa9.57□□□□□ -0.88
APOBEC3A-201ENST00000249116 OR52E5Q8NH55 327 aa9.57□□□□□ -0.88
APOBEC3A-201ENST00000249116 K7EIM0 57 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 NUPL2O15504 423 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ZNF207O43670 478 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ATF4P18848 351 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ADMP35318 185 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 CMC4P56277 68 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 SPCS3P61009 180 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ERHP84090 104 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 COQ8AQ8NI60 647 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 RNF183Q96D59 192 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 TMED3Q9Y3Q3 217 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 HYDINQ4G0P3 5121 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 IGHV3OR16-8A0A075B7F1 116 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 A0A1B0GU03 582 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 NXPH3O95157 252 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 H2AFB2P0C5Z0 115 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 MFAP4P55083 255 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 MAP6D1Q9H9H5 199 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 SMPXQ9UHP9 88 aa9.56□□□□□ -0.88
APOBEC3A-201ENST00000249116 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 YIF1AO95070 293 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 CTSGP08311 255 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 HOXB5P09067 269 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 SLC25A6P12236 298 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 DEFA1P59665 94 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 DEFA3P59666 94 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 GGNBP1Q5YKI7 109 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 TMEM116Q8NCL8 245 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 OR1S1Q8NH92 325 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 MISP3Q96FF7 219 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 TXN2Q99757 166 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 HSPB7Q9UBY9 170 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
APOBEC3A-201ENST00000249116 CEBPZOSA8MTT3 80 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 CHEK1O14757 476 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 PITX3O75364 302 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 ADAP1O75689 374 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 RNASE2P10153 161 aaKnown RBP9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 SNCAP37840 140 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 BSXQ3C1V8 233 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 MITD1Q8WV92 249 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 RNF2Q99496 336 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 SEC22CQ9BRL7 303 aa9.54□□□□□ -0.88
APOBEC3A-201ENST00000249116 TRAV14DV4A0A0A6YYC5 116 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 TFPI2P48307 235 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 PAFAH1B2P68402 229 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 APRG1Q8IVJ8 170 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 DUSP18Q8NEJ0 188 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 ZNF431Q8TF32 576 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 OR10C1Q96KK4 312 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 RBKSQ9H477 322 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 HEYLQ9NQ87 328 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 ALMS1Q8TCU4 4167 aa9.53□□□□□ -0.88
APOBEC3A-201ENST00000249116 MPTX1A8MV57 137 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 FAM90A26D6RGX4 464 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 I3L2K1 104 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 GNG7O60262 68 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 MT-CO2P00403 227 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 CD5P06127 495 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 HTR2BP41595 481 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 SUB1P53999 127 aaKnown RBP eCLIP9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 SLC24A4Q8NFF2 622 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 DTD1Q8TEA8 209 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 GATAD1Q8WUU5 269 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 PINX1Q96BK5 328 aaKnown RBP9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 GINS3Q9BRX5 216 aa9.52□□□□□ -0.89
APOBEC3A-201ENST00000249116 IGKV3-7A0A075B6H7 116 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 IGHV3-49A0A0A0MS15 119 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 CORTO00230 105 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 IFNA21P01568 189 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 IL5P05113 134 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 RARRES2Q99969 163 aa9.51□□□□□ -0.89
APOBEC3A-201ENST00000249116 NPBWR1P48145 328 aa9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 C2orf83Q53S99 150 aa9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 GBGT1Q8N5D6 347 aa9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 TMEM170AQ8WVE7 144 aa9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
APOBEC3A-201ENST00000249116 IGHV3OR16-13A0A075B7E8 117 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 IGHV3-74A0A0B4J1X5 117 aa9.49□□□□□ -0.89
APOBEC3A-201ENST00000249116 INMT-MINDY4F8WBC2 141 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms