RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZFAND3Q9H8U3 227 aa18.28■□□□□ 0.52
SDF2L1-201ENST00000248958 NUDT15Q9NV35 164 aa18.28■□□□□ 0.52
SDF2L1-201ENST00000248958 TRAV6A0A075B6T7 132 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 IGLC1P0CG04 106 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 IAPPP10997 89 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 YPEL3P61236 119 aaPredicted RBP18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 SBSPONQ8IVN8 264 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 TBC1D24Q9ULP9 559 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 SELENOKQ9Y6D0 94 aa18.27■□□□□ 0.52
SDF2L1-201ENST00000248958 OR11H12B2RN74 326 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 IGKV1-17P01599 117 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 H2AFB2P0C5Z0 115 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 OR10J1P30954 320 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 TIGITQ495A1 244 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 Q8WTZ3 238 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 NPIPB3Q92617 1050 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 TMEM231Q9H6L2 316 aa18.26■□□□□ 0.51
SDF2L1-201ENST00000248958 A0A1W2PS18 150 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 WRBO00258 174 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 NKX2-1P43699 371 aaPredicted RBP18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 OR4D5Q8NGN0 318 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 SLC35E1Q96K37 410 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 MAGT1Q9H0U3 335 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 ZMAT4Q9H898 229 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 U3KQK5 164 aa18.25■□□□□ 0.51
SDF2L1-201ENST00000248958 MPTX1A8MV57 137 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 NPPCP23582 126 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 ZNF431Q8TF32 576 aaPredicted RBP18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 ACY3Q96HD9 319 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 METTL26Q96S19 204 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 RNF2Q99496 336 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 VSIRQ9H7M9 311 aa18.24■□□□□ 0.51
SDF2L1-201ENST00000248958 OR4C46A6NHA9 309 aa18.23■□□□□ 0.51
SDF2L1-201ENST00000248958 IAH1Q2TAA2 248 aaPredicted RBP18.23■□□□□ 0.51
SDF2L1-201ENST00000248958 ENKURQ8TC29 256 aa18.23■□□□□ 0.51
SDF2L1-201ENST00000248958 NARS2Q96I59 477 aaKnown RBP18.23■□□□□ 0.51
SDF2L1-201ENST00000248958 DEFB125Q8N687 156 aa18.22■□□□□ 0.51
SDF2L1-201ENST00000248958 PAIP2BQ9ULR5 123 aaKnown RBP18.22■□□□□ 0.51
SDF2L1-201ENST00000248958 STRAPQ9Y3F4 350 aaKnown RBP18.22■□□□□ 0.51
SDF2L1-201ENST00000248958 IGHV3-49A0A0A0MS15 119 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 TOMM40O96008 361 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 CRYBB3P26998 211 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 CMC4P56277 68 aaPredicted RBP18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 PAFAH1B2P68402 229 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 GAMTQ14353 236 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 SPANXN5Q5MJ07 72 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 FAM90A2PQ658T7 463 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 ZBTB8BQ8NAP8 495 aaPredicted RBP18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 FAM110AQ9BQ89 295 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 SRD5A3Q9H8P0 318 aa18.21■□□□□ 0.51
SDF2L1-201ENST00000248958 FABP1P07148 127 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 RD3LP0DJH9 198 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 POLR2GP62487 172 aaKnown RBP eCLIP18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 LINC00322Q6ZN03 302 aaPredicted RBP18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 C12orf45Q8N5I9 185 aaPredicted RBP18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 ST8SIA2Q92186 375 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 TM2D3Q9BRN9 247 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 PSENENQ9NZ42 101 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 DNAH9Q9NYC9 4486 aa18.2■□□□□ 0.5
SDF2L1-201ENST00000248958 IL5P05113 134 aa18.19■□□□□ 0.5
SDF2L1-201ENST00000248958 TCF24Q7RTU0 167 aa18.19■□□□□ 0.5
SDF2L1-201ENST00000248958 GRAMD2BQ96HH9 432 aa18.19■□□□□ 0.5
SDF2L1-201ENST00000248958 SMIM8Q96KF7 97 aa18.19■□□□□ 0.5
SDF2L1-201ENST00000248958 SEC22CQ9BRL7 303 aa18.19■□□□□ 0.5
SDF2L1-201ENST00000248958 IGHV3OR16-13A0A075B7E8 117 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 IGHV3-74A0A0B4J1X5 117 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 ZFP92A6NM28 416 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 APOHP02749 345 aaPredicted RBP18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 DEFA1P59665 94 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 DEFA3P59666 94 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 IFITM3Q01628 133 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 HAGHQ16775 308 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 RAB40CQ96S21 281 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 WFDC10AQ9H1F0 79 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 GSKIPQ9P0R6 139 aa18.18■□□□□ 0.5
SDF2L1-201ENST00000248958 SSSCA1O60232 199 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 SCGB1D2O95969 90 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 HNRNPCP07910 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 TAS2R30P59541 319 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 OR51G1Q8NGK1 321 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 WWC2-AS2Q96NR7 200 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 SPATA25Q9BR10 227 aa18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 GPN1Q9HCN4 374 aaPredicted RBP18.17■□□□□ 0.5
SDF2L1-201ENST00000248958 TRAV2A0A0B4J234 112 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 PRSS46E5RG02 174 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 H3BP45 60 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 IL4P05112 153 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 PSG1P11464 419 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 RCHY1Q96PM5 261 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 TRGV9Q99603 122 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 U3KQE9 123 aa18.16■□□□□ 0.5
SDF2L1-201ENST00000248958 COL7A1Q02388 2944 aa18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 RBMY1BA6NDE4 496 aaKnown RBP18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 RBMY1EA6NEQ0 496 aaKnown RBP18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 DFFBO76075 338 aa18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 RBMY1DP0C7P1 496 aaKnown RBP18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 EIF2B2P49770 351 aaKnown RBP18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 THAP8Q8NA92 274 aa18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 PFDN2Q9UHV9 154 aa18.15■□□□□ 0.5
SDF2L1-201ENST00000248958 RABAC1Q9UI14 185 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms