RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IFNA21P01568 189 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 OR10J1P30954 320 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
VPREB3-201ENST00000248948 LINC00322Q6ZN03 302 aaPredicted RBP9.56□□□□□ -0.88
VPREB3-201ENST00000248948 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 SPATA25Q9BR10 227 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 RHPN1-AS1Q9BWJ2 59 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 VSIRQ9H7M9 311 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
VPREB3-201ENST00000248948 SYNGR2O43760 224 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 ADAP1O75689 374 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 TCRBP04435 133 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 IFNA4P05014 189 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 GPX4P36969 197 aaPredicted RBP9.55□□□□□ -0.88
VPREB3-201ENST00000248948 RAB11AP62491 216 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
VPREB3-201ENST00000248948 ZNF846Q147U1 533 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 DEFB125Q8N687 156 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 METTL26Q96S19 204 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 RNF2Q99496 336 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 SELENOKQ9Y6D0 94 aa9.55□□□□□ -0.88
VPREB3-201ENST00000248948 A0A1W2PS18 150 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 TOMM40O96008 361 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 IAPPP10997 89 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 ASAH1Q13510 395 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 MLANAQ16655 118 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 HAGHQ16775 308 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 TIGITQ495A1 244 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 MZT2BQ6NZ67 158 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
VPREB3-201ENST00000248948 SLC35E1Q96K37 410 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
VPREB3-201ENST00000248948 IGHV3-49A0A0A0MS15 119 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 MPTX1A8MV57 137 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 UPK1BO75841 260 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 NPPCP23582 126 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 CRYBB3P26998 211 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 ID3Q02535 119 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 Q8WTZ3 238 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
VPREB3-201ENST00000248948 DNAH7Q8WXX0 4024 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 TRAV6A0A075B6T7 132 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 FAM240BA0A1B0GVZ2 78 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 RBMY1BA6NDE4 496 aaKnown RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 RBMY1EA6NEQ0 496 aaKnown RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 WRBO00258 174 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 FABP1P07148 127 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 RBMY1DP0C7P1 496 aaKnown RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 NUP62P37198 522 aaPredicted RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
VPREB3-201ENST00000248948 PAFAH1B2P68402 229 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 GRAMD2BQ96HH9 432 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
VPREB3-201ENST00000248948 LOC102724200A0A096LPH7 203 aaPredicted RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 APOHP02749 345 aaPredicted RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 IL4P05112 153 aa9.51□□□□□ -0.89
VPREB3-201ENST00000248948 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 GAMTQ14353 236 aa9.51□□□□□ -0.89
VPREB3-201ENST00000248948 USF2Q15853 346 aaPredicted RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 ZNF431Q8TF32 576 aaPredicted RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 STRAPQ9Y3F4 350 aaKnown RBP9.51□□□□□ -0.89
VPREB3-201ENST00000248948 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 HELTA6NFD8 242 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 ZFP92A6NM28 416 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 H3BP45 60 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 SSSCA1O60232 199 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 H2AFB2P0C5Z0 115 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 RD3LP0DJH9 198 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 P2RY1P47900 373 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 EIF2B2P49770 351 aaKnown RBP9.5□□□□□ -0.89
VPREB3-201ENST00000248948 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPREB3-201ENST00000248948 OR8G2PQ6IF36 304 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 ZBTB8BQ8NAP8 495 aaPredicted RBP9.5□□□□□ -0.89
VPREB3-201ENST00000248948 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 ENKURQ8TC29 256 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 RNF125Q96EQ8 232 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 RAB40CQ96S21 281 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 TRGV9Q99603 122 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 U3KQE9 123 aa9.5□□□□□ -0.89
VPREB3-201ENST00000248948 IGKV1D-37A0A075B6S9 117 aa9.49□□□□□ -0.89
VPREB3-201ENST00000248948 TSC22D2O75157 780 aa9.49□□□□□ -0.89
VPREB3-201ENST00000248948 DFFBO76075 338 aa9.49□□□□□ -0.89
VPREB3-201ENST00000248948 PSG1P11464 419 aa9.49□□□□□ -0.89
VPREB3-201ENST00000248948 APOC4P55056 127 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms