RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
LRFN1-201ENST00000248668 IGHV2-26A0A0B4J1V2 119 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 PPP5D1E7EU14 171 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 BRS3P32247 399 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 PPOXP50336 477 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 LY6DQ14210 128 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 ZNF672Q499Z4 452 aaPredicted RBP12.71□□□□□ -0.38
LRFN1-201ENST00000248668 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 EPG5Q9HCE0 2579 aa12.71□□□□□ -0.38
LRFN1-201ENST00000248668 F6UZH7 168 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 ZNF90Q03938 601 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 TMEM256Q8N2U0 113 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 NUPR1O60356 82 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 TNXAQ16473 311 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 OCC1Q8TAD7 63 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 SETD2Q9BYW2 2564 aaPredicted RBP12.7□□□□□ -0.38
LRFN1-201ENST00000248668 A0A1W2PPI3 338 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 GAGE1Q13065 139 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 ASPHD1Q5U4P2 390 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 NAGKQ9UJ70 344 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 ITPR1Q14643 2758 aa12.7□□□□□ -0.38
LRFN1-201ENST00000248668 PPIAL4CA0A0B4J2A2 164 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 DLL1O00548 723 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 PPIAL4GP0DN37 164 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 KLRB1Q12918 225 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 SSX8Q7RTT4 187 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 OR2T10Q8NGZ9 312 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 CD24P25063 80 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 CRYBB3P26998 211 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 SLC17A3O00476 420 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 MOSP00540 346 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 AREGP15514 252 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 INSIG2Q9Y5U4 225 aa12.69□□□□□ -0.38
LRFN1-201ENST00000248668 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 MMDQ15546 238 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 ZNF841Q6ZN19 808 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 SVIPQ8NHG7 77 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 VSTM2AQ8TAG5 236 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 ANAPC16Q96DE5 110 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 MS4A10Q96PG2 267 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 PTPN13Q12923 2485 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 VENTXO95231 258 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 PNKDQ8N490 385 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 LINC00311Q8N616 119 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 ST6GALNAC3Q8NDV1 305 aa12.68□□□□□ -0.38
LRFN1-201ENST00000248668 CCL25O15444 150 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 MT-CO2P00403 227 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 ARF6P62330 175 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 SGMS2Q8NHU3 365 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 SFRP2Q96HF1 295 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 KIR2DL5BA0A0G2JN68 375 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 KIR2DL5BA0A0G2JPC4 375 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 PYYP10082 97 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 SUMO1P63165 101 aaKnown RBP12.67□□□□□ -0.38
LRFN1-201ENST00000248668 KIR2DL5AQ8N109 375 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 OR4C5Q8NGB2 326 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 GSX1Q9H4S2 264 aaPredicted RBP12.67□□□□□ -0.38
LRFN1-201ENST00000248668 M0QZK8 103 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
LRFN1-201ENST00000248668 IL3RAP26951 378 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 TMEM249Q2WGJ8 235 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 ALKBH7Q9BT30 221 aaPredicted RBP12.67□□□□□ -0.38
LRFN1-201ENST00000248668 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
LRFN1-201ENST00000248668 A0A1W2PN81 502 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 K7EN84 100 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 OR5G3P0C626 314 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 VN1R17PQ8TDU5 208 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 TECRQ9NZ01 308 aaKnown RBP12.66□□□□□ -0.38
LRFN1-201ENST00000248668 HILPDAQ9Y5L2 63 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 C22orf46C9J442 243 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 RPEQ96AT9 228 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 CLEC7AQ9BXN2 247 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRFN1-201ENST00000248668 KLRD1Q13241 179 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 COL5A1-AS1Q5SY13 56 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 TLN2Q9Y4G6 2542 aa12.66□□□□□ -0.38
LRFN1-201ENST00000248668 IGHV1-3A0A0C4DH29 117 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 ORM2P19652 201 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 PLGLAQ15195 96 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 OR5AU1Q8NGC0 362 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 BUB1B-PAK6H3BSN5 160 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 MC5RP33032 325 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 UCNP55089 124 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 KCNIP4Q6PIL6 250 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 SMIM15Q7Z3B0 74 aa12.65□□□□□ -0.38
LRFN1-201ENST00000248668 GBGT1Q8N5D6 347 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms