RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
HDHD3-201ENST00000238379 KLK9Q9UKQ9 250 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 F8W036 122 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 SMAD7O15105 426 aaKnown RBP11.94□□□□□ -0.5
HDHD3-201ENST00000238379 IGHV4-59P01825 116 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 APOC3P02656 99 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 BCL2P10415 239 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 IER3P46695 156 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 CRIP2P52943 208 aaPredicted RBP11.94□□□□□ -0.5
HDHD3-201ENST00000238379 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 C16orf82Q7Z2V1 217 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
HDHD3-201ENST00000238379 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
HDHD3-201ENST00000238379 G3V318 75 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 CLN5O75503 358 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 NDUFB8O95169 186 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 OR5G3P0C626 314 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 RXFP4Q8TDU9 374 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 THYN1Q9P016 225 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 TLN2Q9Y4G6 2542 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 OR2J3O76001 311 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
HDHD3-201ENST00000238379 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
HDHD3-201ENST00000238379 IFNA1P01562 189 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 IGHG2P01859 326 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
HDHD3-201ENST00000238379 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
HDHD3-201ENST00000238379 BLCAPP62952 87 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 PATE2Q6UY27 113 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
HDHD3-201ENST00000238379 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
HDHD3-201ENST00000238379 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 VAX2Q9UIW0 290 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 FBXL7Q9UJT9 491 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 S4R3C0 116 aa11.92□□□□□ -0.5
HDHD3-201ENST00000238379 TRBV9A0A0B4J1U6 114 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
HDHD3-201ENST00000238379 CXorf1O96002 111 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 IGF1P05019 195 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 PSMB3P49720 205 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 C9orf152Q5JTZ5 239 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 Q6YL49 198 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
HDHD3-201ENST00000238379 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 NPBWR1P48145 328 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 MFAP4P55083 255 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 DEFA5Q01523 94 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 KRTAP1-1Q07627 177 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 TIGITQ495A1 244 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 IQCF2Q8IXL9 164 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 OR1L4Q8NGR5 311 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 OR5R1Q8NH85 324 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 C21orf62Q9NYP8 219 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 DOK5Q9P104 306 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 COX7A2P2O60397 106 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 PSG1P11464 419 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 Q6ZS46 218 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 PFDN5Q99471 154 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 RNF2Q99496 336 aa11.9□□□□□ -0.5
HDHD3-201ENST00000238379 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
HDHD3-201ENST00000238379 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
HDHD3-201ENST00000238379 GCHFRP30047 84 aa11.89□□□□□ -0.51
HDHD3-201ENST00000238379 PLP1P60201 277 aa11.89□□□□□ -0.51
HDHD3-201ENST00000238379 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
HDHD3-201ENST00000238379 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
HDHD3-201ENST00000238379 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
HDHD3-201ENST00000238379 LINC00527Q9UJ94 153 aa11.89□□□□□ -0.51
HDHD3-201ENST00000238379 TRAV30A0A087WSZ9 112 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 GNG7O60262 68 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 PAGE4O60829 102 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 SCO1O75880 301 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 ORM2P19652 201 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
HDHD3-201ENST00000238379 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
HDHD3-201ENST00000238379 CD81P60033 236 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 RHOGP84095 191 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
HDHD3-201ENST00000238379 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 CYB561D1Q8N8Q1 229 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF503Q96F45 646 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 FAM167A-AS1Q96KT0 104 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms