RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 DHRS13Q6UX07 377 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 FAM169BQ8N8A8 192 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 RNF7Q9UBF6 113 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
DDX55-201ENST00000238146 IGKV1D-37A0A075B6S9 117 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 PLAUP00749 431 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 OSR1Q8TAX0 266 aaPredicted RBP12.53□□□□□ -0.4
DDX55-201ENST00000238146 ST6GALNAC6Q969X2 333 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 HARBI1Q96MB7 349 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
DDX55-201ENST00000238146 PROCRQ9UNN8 238 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 NCOR1O75376 2440 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 OR4C46A6NHA9 309 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 M0QZ24 198 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 CRXO43186 299 aaPredicted RBP12.53□□□□□ -0.4
DDX55-201ENST00000238146 CD59P13987 128 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
DDX55-201ENST00000238146 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
DDX55-201ENST00000238146 TCRBV4S1A1TA0A5B7 111 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 M0R1B8 84 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 CD24P25063 80 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 FOXA3P55318 350 aaPredicted RBP12.52□□□□□ -0.41
DDX55-201ENST00000238146 BPIFB3P59826 476 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 WT1-ASQ06250 92 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 MRPL36Q9P0J6 103 aaKnown RBP12.52□□□□□ -0.41
DDX55-201ENST00000238146 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 GLRXP35754 106 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 GATA4P43694 442 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 HBBP68871 147 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.41
DDX55-201ENST00000238146 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 LINC00305Q7Z4B0 112 aa12.52□□□□□ -0.41
DDX55-201ENST00000238146 ZFHX4Q86UP3 3567 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 CA7P43166 264 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 ZNF788Q6ZQV5 615 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 KLF12Q9Y4X4 402 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 TM4SF5O14894 197 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 SLC25A5P05141 298 aaKnown RBP12.51□□□□□ -0.41
DDX55-201ENST00000238146 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 MLST8Q9BVC4 326 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 C1RLQ9NZP8 487 aa12.51□□□□□ -0.41
DDX55-201ENST00000238146 SVILO95425 2214 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 MOSP00540 346 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 APOA2P02652 100 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
DDX55-201ENST00000238146 CCL11P51671 97 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 GTSF1Q8WW33 167 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 GPR82Q96P67 336 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 PRSS22Q9GZN4 317 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 PGPA6NDG6 321 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 FAM162BQ5T6X4 162 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 FDCSPQ8NFU4 85 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
DDX55-201ENST00000238146 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
DDX55-201ENST00000238146 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 CDKN1BP46527 198 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 TMEM177Q53S58 311 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 LHFPL4Q7Z7J7 247 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
DDX55-201ENST00000238146 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 RAI1Q7Z5J4 1906 aaPredicted RBP12.49□□□□□ -0.41
DDX55-201ENST00000238146 REG1BP48304 166 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 TNFAIP6P98066 277 aaPredicted RBP12.49□□□□□ -0.41
DDX55-201ENST00000238146 CHCHD1Q96BP2 118 aaKnown RBP12.49□□□□□ -0.41
DDX55-201ENST00000238146 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
DDX55-201ENST00000238146 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
DDX55-201ENST00000238146 A8MWL6 223 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 VAMP3Q15836 100 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 ERASQ7Z444 233 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 TRAV30A0A087WSZ9 112 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 hADV38S2A0JD32 116 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
DDX55-201ENST00000238146 ORM2P19652 201 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms