RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 PRR31Q5SQ13 230 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 LIPT2A6NK58 231 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 PRB1P04280 392 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 TMEM187Q14656 261 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 TRBV5-4A0A0C4DH59 114 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 AZU1P20160 251 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
MSH6-201ENST00000234420 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 A0A1W2PRE2 83 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 CXCL1P09341 107 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.916e-6■■■■□ 21.2
MSH6-201ENST00000234420 CSRP2Q16527 193 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 ZNF818PQ6ZRF7 136 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 AQP3Q92482 292 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 A0A096LPF7 62 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 B9A039 149 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 FAM90A26D6RGX4 464 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 CISD3P0C7P0 127 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 SLC25A38Q96DW6 304 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 A0A087WX48 190 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 DKK4Q9UBT3 224 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 ATG4DQ86TL0 474 aaPredicted RBP9.35□□□□□ -0.91
MSH6-201ENST00000234420 JPT2Q9H910 190 aa9.35□□□□□ -0.91
MSH6-201ENST00000234420 SLC25A45Q8N413 288 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 CCL1P22362 96 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 TMEM258P61165 79 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 HAPLN4Q86UW8 402 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 KLF14Q8TD94 323 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 PTPRDP23468 1912 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
MSH6-201ENST00000234420 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 GDF15Q99988 308 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 CLPSL1A2RUU4 121 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 FGF12P61328 243 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 TMEM105Q8N8V8 129 aa9.34□□□□□ -0.91
MSH6-201ENST00000234420 CD5P06127 495 aa9.34□□□□□ -0.92
MSH6-201ENST00000234420 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.92
MSH6-201ENST00000234420 TMEM86BQ8N661 226 aa9.34□□□□□ -0.92
MSH6-201ENST00000234420 IGKV1D-42A0A075B6H8 117 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 IGFBP2P18065 325 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 Q0VFX4 171 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 TFF1P04155 84 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 CELA3AP09093 270 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 PSG4Q00888 419 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 TRAV41A0A0B4J266 112 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 PAX4O43316 350 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 KLRD1Q13241 179 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 PPIFP30405 207 aaKnown RBP9.33□□□□□ -0.92
MSH6-201ENST00000234420 GNG5P63218 68 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 NEU4Q8WWR8 484 aaPredicted RBP9.33□□□□□ -0.92
MSH6-201ENST00000234420 ZNF703Q9H7S9 590 aaPredicted RBP9.33□□□□□ -0.92
MSH6-201ENST00000234420 TRBV20-1A0A075B6N2 111 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.33□□□□□ -0.92
MSH6-201ENST00000234420 NPIPB13A6NJU9 1138 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 F5H768 121 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 MDS2Q8NDY4 140 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 GATAD1Q8WUU5 269 aa9.33□□□□□ -0.92
MSH6-201ENST00000234420 FOXD3Q9UJU5 478 aaPredicted RBP9.33□□□□□ -0.92
MSH6-201ENST00000234420 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 PEX11BO96011 259 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 WNT2P09544 360 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 CD28P10747 220 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 MPV17P39210 176 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 DRAM1Q8N682 238 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
MSH6-201ENST00000234420 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 MARS2Q96GW9 593 aaKnown RBP9.32□□□□□ -0.92
MSH6-201ENST00000234420 SRXN1Q9BYN0 137 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 NDUFC2O95298 119 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 CHCHD1Q96BP2 118 aaKnown RBP9.32□□□□□ -0.92
MSH6-201ENST00000234420 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
MSH6-201ENST00000234420 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 H3BMM0 161 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 PRB2P02812 416 aaPredicted RBP9.32□□□□□ -0.92
MSH6-201ENST00000234420 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 UBE2WQ96B02 151 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms