RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CBLN1P23435 193 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 TAS2R30P59541 319 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 VAMP2P63027 116 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 CD69Q07108 199 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 IL34Q6ZMJ4 242 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 ZNF600Q6ZNG1 722 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 TMEM116Q8NCL8 245 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 SLC35E1Q96K37 410 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
SF3B6-201ENST00000233468 MAGT1Q9H0U3 335 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 IGHV3-35A0A0C4DH35 117 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 WI2-2373I1.2A0A1W2PRP0 233 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 MPTX1A8MV57 137 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 SSSCA1O60232 199 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 IGHV3-48P01763 117 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 ADMP35318 185 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 POLR2GP62487 172 aaKnown RBP eCLIP8.57□□□□□ -1.04
SF3B6-201ENST00000233468 CYCSP99999 105 aaKnown RBP8.57□□□□□ -1.04
SF3B6-201ENST00000233468 SPANXN5Q5MJ07 72 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 LAMTOR1Q6IAA8 161 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 PRSS54Q6PEW0 395 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 SLC16A13Q7RTY0 426 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 Q8WTZ3 238 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 NARS2Q96I59 477 aaKnown RBP8.57□□□□□ -1.04
SF3B6-201ENST00000233468 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 FNDC4Q9H6D8 234 aaPredicted RBP8.57□□□□□ -1.04
SF3B6-201ENST00000233468 PSENENQ9NZ42 101 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 DNAH9Q9NYC9 4486 aa8.57□□□□□ -1.04
SF3B6-201ENST00000233468 TRAV14DV4A0A0A6YYC5 116 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TMEM213A2RRL7 107 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 SSNA1O43805 119 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TSC22D2O75157 780 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 CD5P06127 495 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 GP9P14770 177 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 OR10J1P30954 320 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 RND2P52198 227 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TM4SF20Q53R12 229 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 UNQ9165/PRO28630Q6UXU0 137 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 RBPMS2Q6ZRY4 209 aaKnown RBP8.56□□□□□ -1.04
SF3B6-201ENST00000233468 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TMEM170AQ8WVE7 144 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 ACY3Q96HD9 319 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TMEM231Q9H6L2 316 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 PFDN2Q9UHV9 154 aa8.56□□□□□ -1.04
SF3B6-201ENST00000233468 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 A0A1W2PS18 150 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 CCSO14618 274 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 RLN2P04090 185 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 SPNP16150 400 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 YPEL3P61236 119 aaPredicted RBP8.55□□□□□ -1.04
SF3B6-201ENST00000233468 MLANAQ16655 118 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
SF3B6-201ENST00000233468 PUS1Q9Y606 427 aaKnown RBP eCLIP8.55□□□□□ -1.04
SF3B6-201ENST00000233468 ZFP92A6NM28 416 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 GOSR2O14653 212 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 CFDP00746 253 aaPredicted RBP8.54□□□□□ -1.04
SF3B6-201ENST00000233468 MBPP02686 304 aaPredicted RBP8.54□□□□□ -1.04
SF3B6-201ENST00000233468 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 RD3LP0DJH9 198 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 NPPCP23582 126 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 S100A7P31151 101 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 BCAP31P51572 246 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 GAMTQ14353 236 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 RGS21Q2M5E4 152 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
SF3B6-201ENST00000233468 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 OR10P1Q8NGE3 313 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 METTL26Q96S19 204 aa8.54□□□□□ -1.04
SF3B6-201ENST00000233468 LSM5Q9Y4Y9 91 aaKnown RBP8.54□□□□□ -1.04
SF3B6-201ENST00000233468 IGHV7-4-1A0A0J9YVY3 117 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 H3BP45 60 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 K7EPK0 472 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 NUP62P37198 522 aaPredicted RBP8.53□□□□□ -1.04
SF3B6-201ENST00000233468 S100A10P60903 97 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 GUCA2BQ16661 112 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 TIGITQ495A1 244 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 BTNL8Q6UX41 500 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 GRAMD2BQ96HH9 432 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 GGACTQ9BVM4 153 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 NMES1Q9C002 83 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 MGAT4CQ9UBM8 478 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 SMPXQ9UHP9 88 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
SF3B6-201ENST00000233468 SMAD5-AS1Q9Y6J3 95 aa8.53□□□□□ -1.04
SF3B6-201ENST00000233468 C7orf66A4D0T2 115 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 FNDC10F2Z333 226 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 TOMM40O96008 361 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 PET100P0DJ07 73 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 EIF2B2P49770 351 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms