RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ATG12O94817 140 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 IFNA17P01571 189 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 FOLR2P14207 255 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 GP9P14770 177 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
VEGFA-201ENST00000230480 CBLN1P23435 193 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 LGI3Q8N145 548 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 MISP3Q96FF7 219 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 ARL6Q9H0F7 186 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 MLXQ9UH92 298 aa10.35□□□□□ -0.75
VEGFA-201ENST00000230480 NBEAL2Q6ZNJ1 2754 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 ERHP84090 104 aaKnown RBP10.34□□□□□ -0.75
VEGFA-201ENST00000230480 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 ZNF345Q14585 488 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-201ENST00000230480 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 OR1L6Q8NGR2 347 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 TMEM190Q8WZ59 177 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 SEC22CQ9BRL7 303 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 THYN1Q9P016 225 aa10.34□□□□□ -0.75
VEGFA-201ENST00000230480 IGHV3OR16-8A0A075B7F1 116 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 A0A1B0GU03 582 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 F8W036 122 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 ADAP1O75689 374 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 TMEM50AO95807 157 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 APOC3P02656 99 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 OR4E1P0C645 316 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 VAMP1P23763 118 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 DHRS2Q13268 280 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 C2orf83Q53S99 150 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 DEFB121Q5J5C9 76 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 GGNBP1Q5YKI7 109 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 OR52B4Q8NGK2 314 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-201ENST00000230480 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 RBKSQ9H477 322 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-201ENST00000230480 MBD2Q9UBB5 411 aa10.33□□□□□ -0.76
VEGFA-201ENST00000230480 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 ARPC5O15511 151 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
VEGFA-201ENST00000230480 OR2F1Q13607 317 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 LYG2Q86SG7 212 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 LILRB2Q8N423 598 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 B9D2Q9BPU9 175 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
VEGFA-201ENST00000230480 FXYD6-FXYD2A0A087WZ82 144 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 DUXBA0A1W2PPF3 345 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 ZNF320A2RRD8 509 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 PCP4L1A6NKN8 68 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 HOXB5P09067 269 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 SLC25A4P12235 298 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 SLC25A6P12236 298 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 MEOX2P50222 304 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 MFAP4P55083 255 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 TMEM61Q8N0U2 210 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 SVBPQ8N300 66 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 KCNRGQ8N5I3 272 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 RNASE11Q8TAA1 199 aaKnown RBP10.31□□□□□ -0.76
VEGFA-201ENST00000230480 PINX1Q96BK5 328 aaKnown RBP10.31□□□□□ -0.76
VEGFA-201ENST00000230480 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-201ENST00000230480 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
VEGFA-201ENST00000230480 OR10C1Q96KK4 312 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 C12orf57Q99622 126 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 TXN2Q99757 166 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 MFFQ9GZY8 342 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
VEGFA-201ENST00000230480 C15orf62A8K5M9 175 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 PRSS46E5RG02 174 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 NDUFA4O00483 81 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 BCL2L11O43521 198 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
VEGFA-201ENST00000230480 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-201ENST00000230480 CD7P09564 240 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 SNCAP37840 140 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 ELLP55199 621 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-201ENST00000230480 SRPXP78539 464 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 ID3Q02535 119 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 Q56UQ5 140 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 PRSS54Q6PEW0 395 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-201ENST00000230480 LINC00469Q8N7U9 141 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 UBAC2Q8NBM4 344 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 OR4X1Q8NH49 305 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 CARHSP1Q9Y2V2 147 aaKnown RBP10.3□□□□□ -0.76
VEGFA-201ENST00000230480 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
VEGFA-201ENST00000230480 KANTRA0A1W2PQU2 76 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 FAM74A7A6NL05 159 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 K7EMT4 169 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 SNAPINO95295 136 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms