RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LAMTOR2Q9Y2Q5 125 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 PLCE1Q9P212 2302 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 GGTLC3B5MD39 225 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 VKORC1L1Q8N0U8 176 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 TSKUQ8WUA8 353 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 RCHY1Q96PM5 261 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 CALYQ9NYX4 217 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 C1RLQ9NZP8 487 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 PSMB11A5LHX3 300 aa16.65■□□□□ 0.26
SNX3-201ENST00000230085 CACNG8Q8WXS5 425 aa16.65■□□□□ 0.26
SNX3-201ENST00000230085 SMIM12Q96EX1 92 aa16.65■□□□□ 0.26
SNX3-201ENST00000230085 IGHV3-64DA0A0J9YX35 117 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 APCSP02743 223 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 C8orf88P0DMB2 117 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 SRIP30626 198 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 ZNF714Q96N38 554 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 SLC25A33Q9BSK2 321 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 TACC2O95359 2948 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 GOSR1O95249 250 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 DMRTA1Q5VZB9 504 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 C18orf32Q8TCD1 76 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 DUSP13Q9UII6 198 aa16.64■□□□□ 0.25
SNX3-201ENST00000230085 AKAP6Q13023 2319 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 IGHV2-26A0A0B4J1V2 119 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 UPK2O00526 184 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 NDUFB8O95169 186 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 LHBP01229 141 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 TFF1P04155 84 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 HNRNPA3P51991 378 aaKnown RBP16.63■□□□□ 0.25
SNX3-201ENST00000230085 EDDM3AQ14507 147 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 C17orf58Q2M2W7 97 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 FAM162BQ5T6X4 162 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 ATP5L2Q7Z4Y8 100 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 C11orf42Q8N5U0 333 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 OR2V2Q96R30 315 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 RNASE7Q9H1E1 156 aaKnown RBP16.63■□□□□ 0.25
SNX3-201ENST00000230085 DNAJC4Q9NNZ3 241 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 OR51B2Q9Y5P1 312 aa16.63■□□□□ 0.25
SNX3-201ENST00000230085 MMDQ15546 238 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 CT45A1Q5HYN5 189 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 C1orf229Q6ZS94 237 aaPredicted RBP16.62■□□□□ 0.25
SNX3-201ENST00000230085 STPG4Q8N801 248 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 OR2D3Q8NGH3 330 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 CT45A3Q8NHU0 189 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 PLEKHA3Q9HB20 300 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 SLC35D1Q9NTN3 355 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 TANC2Q9HCD6 1990 aa16.62■□□□□ 0.25
SNX3-201ENST00000230085 IGKV1OR2-108A0A075B7D4 117 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 SAA2P0DJI9 122 aaPredicted RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 ZNF672Q499Z4 452 aaPredicted RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 BORCS7Q96B45 105 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 FAM167A-AS1Q96KT0 104 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 ZNF331Q9NQX6 463 aaPredicted RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 ASH1LQ9NR48 2969 aaKnown RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 BET1LQ9NYM9 111 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 KBTBD11-OT1A0A1B0GTJ5 212 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 E7EQL1 145 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 KLF3P57682 345 aaPredicted RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 VHLLQ6RSH7 139 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 Q6ZN92 141 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 OR8B3Q8NGG8 313 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 GRAMD2BQ96HH9 432 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 OR8B2Q96RD0 313 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 FAM103A1Q9BTL3 118 aaKnown RBP16.61■□□□□ 0.25
SNX3-201ENST00000230085 SAP30LQ9HAJ7 183 aa16.61■□□□□ 0.25
SNX3-201ENST00000230085 TRAV9-2A0A087WT02 112 aa16.6■□□□□ 0.25
SNX3-201ENST00000230085 TSPOP30536 169 aa16.6■□□□□ 0.25
SNX3-201ENST00000230085 CD69Q07108 199 aa16.6■□□□□ 0.25
SNX3-201ENST00000230085 STUMQ69YW2 141 aa16.6■□□□□ 0.25
SNX3-201ENST00000230085 TXN2Q99757 166 aa16.6■□□□□ 0.25
SNX3-201ENST00000230085 J3QR06 171 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 PMCHP20382 165 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 HOXA4Q00056 320 aaPredicted RBP16.59■□□□□ 0.25
SNX3-201ENST00000230085 NUP37Q8NFH4 326 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 FLNBO75369 2602 aaKnown RBP16.59■□□□□ 0.25
SNX3-201ENST00000230085 H0YJW9 148 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 K7EP13 123 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 RNASE2P10153 161 aaKnown RBP16.59■□□□□ 0.25
SNX3-201ENST00000230085 USF1P22415 310 aaPredicted RBP16.59■□□□□ 0.25
SNX3-201ENST00000230085 GATA4P43694 442 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 UBTD1Q9HAC8 227 aa16.59■□□□□ 0.25
SNX3-201ENST00000230085 SPG11Q96JI7 2443 aa16.58■□□□□ 0.25
SNX3-201ENST00000230085 CRXO43186 299 aaPredicted RBP16.58■□□□□ 0.24
SNX3-201ENST00000230085 OR7C2O60412 319 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 SLAQ13239 276 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 LTC4SQ16873 150 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 NRGNQ92686 78 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 CLEC7AQ9BXN2 247 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 FAM234AQ9H0X4 552 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 ABCA12Q86UK0 2595 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 UNC79Q9P2D8 2635 aa16.58■□□□□ 0.24
SNX3-201ENST00000230085 APCP25054 2843 aa16.57■□□□□ 0.24
SNX3-201ENST00000230085 IGHV1-69-2A0A0G2JMI3 117 aa16.57■□□□□ 0.24
SNX3-201ENST00000230085 ACTL6BO94805 426 aa16.57■□□□□ 0.24
SNX3-201ENST00000230085 IGHV3-13P01766 116 aa16.57■□□□□ 0.24
SNX3-201ENST00000230085 GLRXP35754 106 aa16.57■□□□□ 0.24
SNX3-201ENST00000230085 FXYD3Q14802 87 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms