RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
SCNN1A-201ENST00000228916 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
SCNN1A-201ENST00000228916 COX7A2P2O60397 106 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 SAA1P0DJI8 122 aaPredicted RBP11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 KIR2DL2P43627 348 aaPredicted RBP11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 OR1L4Q8NGR5 311 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 NUDT3O95989 172 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 C10orf113Q5VZT2 155 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
SCNN1A-201ENST00000228916 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 RNF151Q2KHN1 245 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 MOGAT3Q86VF5 341 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 M0QZ24 198 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 GNG5P63218 68 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 TCF24Q7RTU0 167 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 PRSS22Q9GZN4 317 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 LINC00574Q9H8X3 128 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 CT83Q5H943 113 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 CST9LQ9H4G1 147 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
SCNN1A-201ENST00000228916 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 ERASQ7Z444 233 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 BPIFB3P59826 476 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 FAM222BQ8WU58 562 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 GPR82Q96P67 336 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
SCNN1A-201ENST00000228916 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 MUC21A0A0G2JKD1 596 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 MUC21A0A140T8X8 626 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 OR2T8A6NH00 312 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 OCIAD2Q56VL3 154 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 MUC21Q5SSG8 566 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 FAM201AQ5SY85 155 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 DHRS13Q6UX07 377 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 INTS1Q8N201 2190 aaKnown RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 A8MWL6 223 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 IGHG3P01860 377 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 PSG1P11464 419 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 CD59P13987 128 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 CD24P25063 80 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
SCNN1A-201ENST00000228916 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 PET117Q6UWS5 81 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 CADP27708 2225 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 E7EUB6 86 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 MOSP00540 346 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 LIPFP07098 398 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 MS4A6AQ9H2W1 248 aa11.28□□□□□ -0.6
SCNN1A-201ENST00000228916 TOX4O94842 621 aa11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 SLC25A5P05141 298 aaKnown RBP11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 ETFRF1Q6IPR1 90 aa11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 DKK4Q9UBT3 224 aa11.27□□□□□ -0.6
SCNN1A-201ENST00000228916 CD5LO43866 347 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 STXBP6Q8NFX7 210 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 ITLN1Q8WWA0 313 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms