RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TMEM178AQ8NBL3 297 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 CD5LO43866 347 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 GPR183P32249 361 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 UBE2L3P68036 154 aaKnown RBP11.46□□□□□ -0.57
SF1-201ENST00000227503 RAB31Q13636 194 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 TMEM167BQ9NRX6 74 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 PEF1Q9UBV8 284 aaKnown RBP11.46□□□□□ -0.57
SF1-201ENST00000227503 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.58
SF1-201ENST00000227503 TMPRSS3P57727 454 aa11.46□□□□□ -0.58
SF1-201ENST00000227503 KLF5Q13887 457 aaPredicted RBP11.46□□□□□ -0.58
SF1-201ENST00000227503 C2orf91Q6ZV80 131 aa11.46□□□□□ -0.58
SF1-201ENST00000227503 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 CIDEAO60543 219 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 SP9P0CG40 484 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 SSBP2P81877 361 aaPredicted RBP11.45□□□□□ -0.58
SF1-201ENST00000227503 SMIM21Q3B7S5 101 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 PGLYRP4Q96LB8 373 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 KALRNO60229 2985 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 H3BTX0 84 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 NCR2O95944 276 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 ARF6P62330 175 aa11.45□□□□□ -0.58
SF1-201ENST00000227503 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
SF1-201ENST00000227503 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
SF1-201ENST00000227503 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
SF1-201ENST00000227503 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
SF1-201ENST00000227503 IGHG3P01860 377 aa11.44□□□□□ -0.58
SF1-201ENST00000227503 HTR1DP28221 377 aa11.44□□□□□ -0.58
SF1-201ENST00000227503 CD177Q8N6Q3 437 aa11.44□□□□□ -0.58
SF1-201ENST00000227503 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
SF1-201ENST00000227503 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
SF1-201ENST00000227503 TM4SF20Q53R12 229 aa11.44□□□□□ -0.58
SF1-201ENST00000227503 TMEM191AQ9H0A3 160 aa11.44□□□□□ -0.58
SF1-201ENST00000227503 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
SF1-201ENST00000227503 PAX2Q02962 417 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 CNEP1R1Q8N9A8 125 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 OR2V2Q96R30 315 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 S1PR3Q99500 378 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 G3V4G9 280 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 CECR9P0C854 216 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 FABP6P51161 128 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
SF1-201ENST00000227503 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
SF1-201ENST00000227503 OR4S2Q8NH73 311 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 OR4A5Q8NH83 315 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 WIPF2Q8TF74 440 aaPredicted RBP11.43□□□□□ -0.58
SF1-201ENST00000227503 ENY2Q9NPA8 101 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 IDI2-AS1Q9NZ38 188 aa11.43□□□□□ -0.58
SF1-201ENST00000227503 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
SF1-201ENST00000227503 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 ASCL2Q99929 193 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 FXYD7P58549 80 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 C9orf106Q8NAJ2 232 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 BLNKQ8WV28 456 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 SLC25A2Q9BXI2 301 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 ZNRD1Q9P1U0 126 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 SLC25A10Q9UBX3 287 aaPredicted RBP11.42□□□□□ -0.58
SF1-201ENST00000227503 PRSS47A8MTI9 375 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
SF1-201ENST00000227503 SPINT2O43291 252 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 OR2J3O76001 311 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 ADH4P08319 380 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 PRSS57Q6UWY2 283 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
SF1-201ENST00000227503 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
SF1-201ENST00000227503 C15orf61A6NNL5 157 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 HOXC12P31275 282 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 MEF2CQ06413 473 aaPredicted RBP11.41□□□□□ -0.58
SF1-201ENST00000227503 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 UFSP1Q6NVU6 142 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 BPIFA4PQ86YQ2 179 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 TMEM186Q96B77 213 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 AP1S3Q96PC3 154 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 IGHV3OR15-7A0A075B7D8 119 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 PRDX2P32119 198 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 LGALS7P47929 136 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 LRRC29Q8WV35 223 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 FAM167A-AS1Q96KT0 104 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 MAP1LC3CQ9BXW4 147 aa11.41□□□□□ -0.58
SF1-201ENST00000227503 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.58
SF1-201ENST00000227503 PEX7O00628 323 aa11.4□□□□□ -0.58
SF1-201ENST00000227503 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
SF1-201ENST00000227503 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
SF1-201ENST00000227503 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
SF1-201ENST00000227503 RIF1Q5UIP0 2472 aaKnown RBP11.4□□□□□ -0.58
SF1-201ENST00000227503 A0A1B0GXF2 115 aa11.4□□□□□ -0.58
SF1-201ENST00000227503 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
SF1-201ENST00000227503 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
SF1-201ENST00000227503 HBBP68871 147 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms