RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 TMEM167AQ8TBQ9 72 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 CBLN4Q9NTU7 201 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 SHISA9B4DS77 424 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 IGLV2-8P01709 118 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 IGHV1-8P0DP01 117 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 GRNP28799 593 aaKnown RBP11.77□□□□□ -0.52
CNOT3-201ENST00000221232 LINC00305Q7Z4B0 112 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 NAGKQ9UJ70 344 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.52
CNOT3-201ENST00000221232 AMMECR1Q9Y4X0 333 aaPredicted RBP11.77□□□□□ -0.52
CNOT3-201ENST00000221232 VSTM5A8MXK1 200 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 FNDC10F2Z333 226 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 Q6ZWC4 215 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 TMEM186Q96B77 213 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 A0A1W2PN81 502 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 FAM90A27PA6NNH2 459 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 CDKN1AP38936 164 aa11.77□□□□□ -0.53
CNOT3-201ENST00000221232 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
CNOT3-201ENST00000221232 ASH1LQ9NR48 2969 aaKnown RBP11.76□□□□□ -0.53
CNOT3-201ENST00000221232 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 ATRXP46100 2492 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 VMA21Q3ZAQ7 101 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 ISLRO14498 428 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 PPOXP50336 477 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNOT3-201ENST00000221232 MFAP2P55001 183 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 C11orf42Q8N5U0 333 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 VSTM2AQ8TAG5 236 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
CNOT3-201ENST00000221232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
CNOT3-201ENST00000221232 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 C22orf46C9J442 243 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 TCAPO15273 167 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 CD24P25063 80 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 SPACA3Q8IXA5 215 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 TCRBV4S1A1TA0A5B7 111 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 CORTO00230 105 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 TMEM155Q4W5P6 130 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 DNLZQ5SXM8 178 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 INSIG2Q9Y5U4 225 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 PTPRQQ9UMZ3 2332 aa11.75□□□□□ -0.53
CNOT3-201ENST00000221232 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
CNOT3-201ENST00000221232 PMCHP20382 165 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 TPPP2P59282 170 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 TBR1Q16650 682 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 TMEM30BQ3MIR4 351 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 RNF114Q9Y508 228 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 PGPA6NDG6 321 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 DLX6P56179 175 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 KRTDAPP60985 99 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 CX3CL1P78423 397 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 NEU1Q99519 415 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 PAM16Q9Y3D7 125 aa11.74□□□□□ -0.53
CNOT3-201ENST00000221232 EREGO14944 169 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
CNOT3-201ENST00000221232 SRIP30626 198 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 TAS2R60P59551 318 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-201ENST00000221232 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 COL6A6A6NMZ7 2263 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 IGF2RP11717 2491 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 ZNF253O75346 499 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 GPR6P46095 362 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-201ENST00000221232 CAMPP49913 170 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 ZNF705AQ6ZN79 300 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-201ENST00000221232 TMEM136Q6ZRR5 245 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 C19orf24Q9BVV8 132 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 OSTCQ9NRP0 149 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 S4R3C0 116 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 IGHV2-26A0A0B4J1V2 119 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 SELENOTP62341 195 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 PLGLAQ15195 96 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 KIR3DL3Q8N743 410 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 ASCL2Q99929 193 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 NDUFAF3Q9BU61 184 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-201ENST00000221232 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 JKAMPQ9P055 326 aa11.73□□□□□ -0.53
CNOT3-201ENST00000221232 IGLC7A0M8Q6 106 aa11.72□□□□□ -0.53
CNOT3-201ENST00000221232 PEX7O00628 323 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms