RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 Q8NA96 180 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 OR10X1Q8NGY0 326 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 TMEM167AQ8TBQ9 72 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 ZGRF1Q86YA3 2104 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 IGKV1D-37A0A075B6S9 117 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 TCRBV4S1A1TA0A5B7 111 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 PLAUP00749 431 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 C3orf79P0CE67 100 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 NTF3P20783 257 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 PRR27Q6MZM9 219 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 NUDT10Q8NFP7 164 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 H1FXQ92522 213 aaKnown RBP13.93□□□□□ -0.18
USB1-201ENST00000219281 MBD6Q96DN6 1003 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 NUDT11Q96G61 164 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 MRPL36Q9P0J6 103 aaKnown RBP13.93□□□□□ -0.18
USB1-201ENST00000219281 REG1AP05451 166 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 TNFRSF1AP19438 455 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 CTRLP40313 264 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 MFAP2P55001 183 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 GNG5P63218 68 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 SPACA3Q8IXA5 215 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 NUP35Q8NFH5 326 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 GRAMD2BQ96HH9 432 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 SCNM1Q9BWG6 230 aa13.93□□□□□ -0.18
USB1-201ENST00000219281 ADGRG4Q8IZF6 3080 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 BPIFB3P59826 476 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 TBR1Q16650 682 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 GDF5OSQ5U4N7 250 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 FAM231DQ6ZW35 169 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 NUP37Q8NFH4 326 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 C18orf32Q8TCD1 76 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 FXYD5Q96DB9 178 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 IGLV2-23P01705 113 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 SUB1P53999 127 aaKnown RBP eCLIP13.92□□□□□ -0.18
USB1-201ENST00000219281 PRRX1P54821 245 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 LHFPL4Q7Z7J7 247 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 OR4A5Q8NH83 315 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 VSTM2AQ8TAG5 236 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 LPAR2Q9HBW0 351 aa13.92□□□□□ -0.18
USB1-201ENST00000219281 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 C17orf100A8MU93 164 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 FSTL3O95633 263 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 CYB5R2Q6BCY4 276 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 WIPF2Q8TF74 440 aaPredicted RBP13.91□□□□□ -0.18
USB1-201ENST00000219281 SGK494Q96LW2 274 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 WNT10AQ9GZT5 417 aa13.91□□□□□ -0.18
USB1-201ENST00000219281 A0A0G2JNJ9 132 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 CORTO00230 105 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 DLEU1O43261 78 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 SAP30LQ9HAJ7 183 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 TPSG1Q9NRR2 321 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 Q9UFV3 132 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 PCNX1Q96RV3 2341 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 DPRXA6NFQ7 191 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 ADIPOQQ15848 244 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 RUSC1-AS1Q66K80 236 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 RASL11AQ6T310 242 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 LYPD2Q6UXB3 125 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 TMEM108Q6UXF1 575 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 ZNF841Q6ZN19 808 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 WFDC8Q8IUA0 241 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 THAP8Q8NA92 274 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 BLNKQ8WV28 456 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 RITA1Q96K30 269 aa13.9□□□□□ -0.18
USB1-201ENST00000219281 PPIAL4EA0A075B759 164 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 PPIAL4DF5H284 164 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 SLC25A17O43808 307 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 MOSP00540 346 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 PPIAL4FP0DN26 164 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 ORM2P19652 201 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 GPR6P46095 362 aaPredicted RBP13.89□□□□□ -0.19
USB1-201ENST00000219281 TNXAQ16473 311 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 TMEM186Q96B77 213 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 SSBP4Q9BWG4 385 aaPredicted RBP13.89□□□□□ -0.19
USB1-201ENST00000219281 MRPL27Q9P0M9 148 aaKnown RBP13.89□□□□□ -0.19
USB1-201ENST00000219281 WASHC3Q9Y3C0 194 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 PPIAL4AQ9Y536 164 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 UBE2G1P62253 170 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 C19orf35Q6ZS72 473 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 CCL17Q92583 94 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
USB1-201ENST00000219281 A0A1W2PPI3 338 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 HIGD1CA8MV81 97 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 NPSP0C0P6 89 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 TFPI2P48307 235 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 CAMPP49913 170 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 MMDQ15546 238 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 ATOH7Q8N100 152 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 OR1B1Q8NGR6 318 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 EPDR1Q9UM22 224 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 RPH3ALQ9UNE2 315 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 GOLT1BQ9Y3E0 138 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 C22orf46C9J442 243 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms