RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LTBP2Q14767 1821 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 M0R3E3 92 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 OVOL1O14753 267 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 ZNF324O75467 553 aaPredicted RBP8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 TAS2R60P59551 318 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 RNF166Q96A37 237 aaPredicted RBP8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 IGLV3-9A0A075B6K5 115 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 A0A1B0GWJ7 208 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 VAMP3Q15836 100 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 PCNX2A6NKB5 2137 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 CACNA1DQ01668 2161 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 TRBV9A0A0B4J1U6 114 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 TECTAO75443 2155 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 HBBP68871 147 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 ZNF383Q8NA42 475 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 ZNF502Q8TBZ5 544 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 CXorf65A6NEN9 183 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 QRFPP83859 136 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 Q6AWC8 147 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 REG4Q9BYZ8 158 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 NCOR1P1Q9H4R4 102 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 J3QR89 54 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 RUSC1-AS1Q66K80 236 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 Q6ZR03 302 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 TMEM190Q8WZ59 177 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 FABP5P3A8MUU1 101 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 PRB1P04280 392 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 BTCP35070 178 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 LCNL1Q6ZST4 164 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 TBX15Q96SF7 602 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 VPS25Q9BRG1 176 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 SRSF8Q9BRL6 282 aaKnown RBP8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 WDR83OSQ9Y284 106 aa8.47□□□□□ -1.05
NIPAL3-201ENST00000003912 ROS1P08922 2347 aa8.46□□□□□ -1.05
NIPAL3-201ENST00000003912 LMO1P25800 156 aa8.46□□□□□ -1.05
NIPAL3-201ENST00000003912 F11RQ9Y624 299 aaKnown RBP8.46□□□□□ -1.05
NIPAL3-201ENST00000003912 HEATR1Q9H583 2144 aaKnown RBP8.46□□□□□ -1.05
NIPAL3-201ENST00000003912 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 CFHR2P36980 270 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 PSMG4Q5JS54 123 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 GLMPQ8WWB7 406 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 POLEQ07864 2286 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 M0R143 59 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 SCN8AQ9UQD0 1980 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 PSMB2P49721 201 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 TEX36Q5VZQ5 186 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF329Q86UD4 541 aa8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 HELZP42694 1942 aaKnown RBP8.46□□□□□ -1.06
NIPAL3-201ENST00000003912 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 CD7P09564 240 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 SPTAN1Q13813 2472 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 SNRNP200O75643 2136 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 A0A1B0GW15 77 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 RNF144BQ7Z419 303 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 RPP21Q9H633 154 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 GEMIN7Q9H840 131 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 RNF222A6NCQ9 220 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 DEFB121Q5J5C9 76 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 RNF126Q9BV68 326 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 A0A1W2PRE2 83 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 LINC00473A8K010 186 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 TRGV9Q99603 122 aa8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 SOX21Q9Y651 276 aaPredicted RBP8.45□□□□□ -1.06
NIPAL3-201ENST00000003912 ATP5G3P48201 142 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 PEF1Q9UBV8 284 aaKnown RBP8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF407Q9C0G0 2248 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 A0A1B0GUT8 65 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF503-AS2A6NEH8 195 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 MDKP21741 143 aaPredicted RBP8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 SPRY4Q9C004 299 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 PSG1P11464 419 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 REC114Q7Z4M0 266 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 OR10AG1Q8NH19 301 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 IFITM10A6NMD0 228 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
NIPAL3-201ENST00000003912 MUC21Q5SSG8 566 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 PUSL1Q8N0Z8 303 aaKnown RBP8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 KIR3DL3Q8N743 410 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 OR5AN1Q8NGI8 311 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 PYYP10082 97 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 LOXP28300 417 aaPredicted RBP8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 SRIP30626 198 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 KLF17Q5JT82 389 aaPredicted RBP8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF562Q6V9R5 426 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF524Q96C55 264 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 GRIFINA4D1Z8 144 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms