RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Nmes1Q810Q5 83 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Rnf170Q8CBG9 286 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Mpped1Q91ZG2 326 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Ly6g6dQ9Z1Q3 135 aa13.89□□□□□ -0.19
Shh-201ENSMUST00000002708 Kcns2O35174 477 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 P01660 111 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Ube2zQ3UE37 356 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Klk1b24Q61754 263 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Sp9Q64HY3 484 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr138Q7TRI7 312 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 NracQ8BNX7 165 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Henmt1Q8CAE2 395 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr786Q8VFH8 312 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1230Q8VG58 305 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Rnaseh2cQ9CQ18 166 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Xrcc3Q9CXE6 349 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Chst4Q9R1I1 388 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 OdamA1E960 273 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr224M9MMJ7 314 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Defa-rs2P17534 91 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Fam57aQ5ND56 257 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Zfp948Q6DFU8 667 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 G6pc3Q6NSQ9 346 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 D330020A13RikQ8C799 211 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Efcab10Q9D581 132 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Ccdc54Q9DAL3 329 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Defb3Q9WTL0 63 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Tcf20Q9EPQ8 1987 aa13.88□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm10778A0A087WNP5 499 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr175-ps1A0A140T8K4 308 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm20708H3BKF4 155 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm20821J3QPJ2 227 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Iglc3P01845 104 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Tubg1P83887 451 aaKnown RBP13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Slc46a1Q6PEM8 459 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gpr4Q8BUD0 365 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1295Q8VF48 312 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 RTRAFQ9CQE8 244 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Fscn3Q9QXW4 498 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Myo7bQ99MZ6 2113 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Mrgpra9A0A140T8U8 332 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm17333C6EQI3 125 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm14548E9Q1Z6 680 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm10666K7N6B8 321 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Tnfsf10P50592 291 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 AbraclQ4KML4 81 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Prss46Q5M8S2 314 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Hide1Q75VT8 222 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Znhit1Q8R331 154 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Rnps1Q99M28 305 aaKnown RBP13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr945Q9EQB5 319 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Slc25a10Q9QZD8 287 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 RelnQ60841 3461 aa13.87□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr709-ps1A0A140T8J9 307 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 9130019O22RikG3X941 543 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Hist1h2bfP10853 126 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Ca5aP23589 299 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Cd82P40237 266 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Vipr2P41588 437 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Ctsll3Q3ULP7 331 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Zdhhc23Q5Y5T3 425 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Hist1h2bbQ64475 126 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Hist1h2bkQ8CGP1 126 aaKnown RBP13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Hist1h2bpQ8CGP2 126 aaKnown RBP13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr223Q8VF69 319 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Cisd2Q9CQB5 135 aaKnown RBP13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Cldn23Q9D7D7 296 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Ms4a4bQ9ES61 226 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Nova1Q9JKN6 507 aaKnown RBP13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Clec4eQ9R0Q8 214 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Slurp1Q9Z0K7 110 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Cdhr4H3BJZ2 783 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Nudt10P0C027 164 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Nudt11P0C028 164 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Npy1rQ04573 382 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Rab9bQ8BHH2 201 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Slc25a29Q8BL03 306 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1394Q8VET2 312 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1294Q8VGE5 312 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Klk1b27Q9JM71 263 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm28372A0A087WNV0 220 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Igkv4-50A0A0B4J1J0 117 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm21788J3QNH3 180 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 MpgQ04841 333 aaKnown RBP13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm614Q3V2K1 191 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Degs2Q8R2F2 323 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 CdiptQ8VDP6 213 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr960Q8VET5 316 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr720Q8VF37 316 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1440Q8VFV4 315 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Tsc22d4Q9EQN3 387 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Ramp3Q9WUP1 147 aa13.86□□□□□ -0.19
Shh-201ENSMUST00000002708 Med13Q5SWW4 2171 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Ighv1-47A0A0A6YY41 117 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr196E9PYP4 309 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 FmodP50608 376 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Gng3P63216 75 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Gfod1Q3UHD2 390 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Cfhr1Q61406 343 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Poc1bQ8BHD1 476 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms