RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 IGHV3-72A0A0B4J1Y9 119 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 M0QZK8 103 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 S100A7P31151 101 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 PSMB3P49720 205 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 RUNX1Q01196 453 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 GUK1Q16774 197 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 FFAR4Q5NUL3 377 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 C16orf82Q7Z2V1 217 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 Q8N6K4 173 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 OR10G4Q8NGN3 311 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 OR10G9Q8NGN4 311 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 OR10G7Q8NGN6 311 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 SFT2D1Q8WV19 159 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
PHGDH-234ENST00000642041 TMEM190Q8WZ59 177 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 P2RX4Q99571 388 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
PHGDH-234ENST00000642041 TREM1Q9NP99 234 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 RPRMQ9NS64 109 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 RNF24Q9Y225 148 aa13.66□□□□□ -0.22
PHGDH-234ENST00000642041 CENPVL3A0A0U1RRI6 287 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 FBP1P09467 338 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
PHGDH-234ENST00000642041 SVBPQ8N300 66 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 FAM96BQ9Y3D0 163 aa13.65□□□□□ -0.22
PHGDH-234ENST00000642041 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
PHGDH-234ENST00000642041 SEC14L6B5MCN3 397 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 HLA-DRB1P01911 266 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
PHGDH-234ENST00000642041 SAA4P35542 130 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 RHOBP62745 196 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 KLRD1Q13241 179 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 HNF4GQ14541 408 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 LHFPL4Q7Z7J7 247 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 NARS2Q96I59 477 aaKnown RBP13.64□□□□□ -0.23
PHGDH-234ENST00000642041 PFDN5Q99471 154 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 FBXL15Q9H469 300 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 MANBALQ9NQG1 85 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 PLA2G2EQ9NZK7 142 aa13.64□□□□□ -0.23
PHGDH-234ENST00000642041 TET2Q6N021 2002 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-234ENST00000642041 TRAV30A0A087WSZ9 112 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 IGLC7A0M8Q6 106 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 RBFOX3A6NFN3 312 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 NPIPB5A8MRT5 1133 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 AGPAT2O15120 278 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 CRYGCP07315 174 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 TAS2R45P59539 299 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 WT1-ASQ06250 92 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 FXYD3Q14802 87 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
PHGDH-234ENST00000642041 TNCP24821 2201 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 SNAPINO95295 136 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 OPN1MWP04001 364 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 CDC34P49427 236 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 B2MP61769 119 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 GAMTQ14353 236 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 MRGPRG-AS1Q2M3A8 158 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 ARSJQ5FYB0 599 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 C10orf91Q5T1B1 145 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 TMEM116Q8NCL8 245 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 GGTLC1Q9BX51 225 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 SLC35B3Q9H1N7 401 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 GAR1Q9NY12 217 aaKnown RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 CARHSP1Q9Y2V2 147 aaKnown RBP13.62□□□□□ -0.23
PHGDH-234ENST00000642041 PXMP4Q9Y6I8 212 aa13.62□□□□□ -0.23
PHGDH-234ENST00000642041 MAP1LC3B2A6NCE7 125 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 F8W036 122 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 DEFA4P12838 97 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 ZNF506Q5JVG8 444 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 BPIFCQ8NFQ6 507 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 ABHD5Q8WTS1 349 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 RITA1Q96K30 269 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 MAP1LC3BQ9GZQ8 125 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 ARL2-SNX15V9GYD0 113 aa13.61□□□□□ -0.23
PHGDH-234ENST00000642041 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-234ENST00000642041 CGB1A6NKQ9 187 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 CXorf1O96002 111 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 CTRB1P17538 263 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 GNB1P62873 340 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 PRR20EP86478 221 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 PRR20CP86479 221 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 PRR20DP86480 221 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 PRR20BP86481 221 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 PRR20AP86496 221 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 LDLRAD2Q5SZI1 272 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 CTRB2Q6GPI1 263 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms