RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	UHRF2	Q96PU4	802 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	GPR61	Q9BZJ8	451 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	TMEM167B	Q9NRX6	74 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	MIOX	Q9UGB7	285 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	SPTBN4	Q9H254	2564 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	IGHV3-21	A0A0B4J1V1	117 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	MDFIC2	A0A1B0GVS7	189 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	GGTLC3	B5MD39	225 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	C8orf88	P0DMB2	117 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	CD99	P14209	185 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	CRYBB3	P26998	211 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	PQLC2	Q6ZP29	291 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	MMD2	Q8IY49	270 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	HIST3H2BB	Q8N257	126 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	FAM167A-AS1	Q96KT0	104 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891		A0A0U1RQK1	487 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	TCRBV4S1A1T	A0A5B7	111 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	PPP1R2P9	O14990	202 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	RBP4	P02753	201 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	ARF6	P62330	175 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	PATE2	Q6UY27	113 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	LY6G5B	Q8NDX9	201 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	FBXL15	Q9H469	300 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	DNAJC4	Q9NNZ3	241 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	NIT2	Q9NQR4	276 aa		13.59	□□□□□ -0.23
PHGDH-229	ENST00000641891	LY6L	H3BQJ8	138 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	MOS	P00540	346 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	LIPF	P07098	398 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	COMP	P49747	757 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	TAS2R45	P59539	299 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	KCNIP4	Q6PIL6	250 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	C19orf24	Q9BVV8	132 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	TPR	P12270	2363 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891		A0A1W2PPR1	153 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	COX7A2P2	O60397	106 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	KLRD1	Q13241	179 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	TEX38	Q6PEX7	206 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	THAP8	Q8NA92	274 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	OR5AU1	Q8NGC0	362 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	TACC2	O95359	2948 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	ARHGAP32	A7KAX9	2087 aa		13.58	□□□□□ -0.24
PHGDH-229	ENST00000641891	FCN1	O00602	326 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	PYY	P10082	97 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	PPP1R27	Q86WC6	154 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	MRPL32	Q9BYC8	188 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	ZNF355P	Q9NSJ1	428 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	GAR1	Q9NY12	217 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	ARL2-SNX15	V9GYD0	113 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	COL6A6	A6NMZ7	2263 aa		13.57	□□□□□ -0.24
PHGDH-229	ENST00000641891	TEX22	C9J3V5	150 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	OR5I1	Q13606	314 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	C10orf113	Q5VZT2	155 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	LHFPL4	Q7Z7J7	247 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	SGMS2	Q8NHU3	365 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	TIMD4	Q96H15	378 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	EAF1	Q96JC9	268 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	SLC17A3	O00476	420 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	TIMM23	O14925	209 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	TYMS	P04818	313 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	SNRPC	P09234	159 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	SUMO1	P63165	101 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	UBE2L3	P68036	154 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	CENPW	Q5EE01	88 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	ACTL10	Q5JWF8	245 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	OR10G8	Q8NGN5	311 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	OR10D4P	Q8NGN7	298 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	DMRT1	Q9Y5R6	373 aa		13.56	□□□□□ -0.24
PHGDH-229	ENST00000641891	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891		A0A1W2PRD5	423 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891		A0A1W2PRF3	423 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891		A0A1W2PRM7	423 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	ZNF320	A2RRD8	509 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891		C9JCJ5	164 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	S100A2	P29034	98 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	TPTE2P1	Q5T6R2	138 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	PVRIG	Q6DKI7	326 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	HILPDA	Q9Y5L2	63 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	CRYGC	P07315	174 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	FBLN7	Q53RD9	439 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	PYY3	Q5JQD4	70 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	GSX1	Q9H4S2	264 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	TNFRSF19	Q9NS68	423 aa		13.55	□□□□□ -0.24
PHGDH-229	ENST00000641891	HELT	A6NFD8	242 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	FABP4	P15090	132 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	CD24	P25063	80 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	CDPF1	Q6NVV7	123 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	OR1L4	Q8NGR5	311 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	NDUFS7	O75251	213 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	CDKN1A	P38936	164 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	GNG4	P50150	75 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	LCN2	P80188	198 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	FOXL1	Q12952	345 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	PLGLA	Q15195	96 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	NEU4	Q8WWR8	484 aa	Predicted RBP	13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	SRSF12	Q8WXF0	261 aa	Known RBP	13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	IMMP2L	Q96T52	175 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	PFDN5	Q99471	154 aa		13.54	□□□□□ -0.24
PHGDH-229	ENST00000641891	RNF2	Q99496	336 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms