RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 GOSR2O14653 212 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 DHFRP00374 187 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 IFNA21P01568 189 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 IGHV3-23P01764 117 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 RNASE2P10153 161 aaKnown RBP5.65□□□□□ -1.5
PHGDH-225ENST00000641720 IAPPP10997 89 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 DEFA4P12838 97 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 CDX1P47902 265 aaPredicted RBP5.65□□□□□ -1.5
PHGDH-225ENST00000641720 C15orf32Q32M92 178 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 FAM223AQ8IWN6 122 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 NECAP1Q8NC96 275 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 OR1P1Q8NH06 330 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 DTD1Q8TEA8 209 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 WDR89Q96FK6 387 aaPredicted RBP5.65□□□□□ -1.5
PHGDH-225ENST00000641720 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 ZMAT5Q9UDW3 170 aaKnown RBP5.65□□□□□ -1.5
PHGDH-225ENST00000641720 RCL1Q9Y2P8 373 aaKnown RBP5.65□□□□□ -1.5
PHGDH-225ENST00000641720 SMAD5-AS1Q9Y6J3 95 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 IGHV4OR15-8A0A075B7B6 117 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 A0A087WW49 117 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 ANKRD34BA5PLL1 514 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 FAM90A26D6RGX4 464 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 H3BP45 60 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 I3L2K1 104 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 K7EIM0 57 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 SSNA1O43805 119 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 SSSCA1O60232 199 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 SIX6O95475 246 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 TMEM50AO95807 157 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 IGHV3-48P01763 117 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 HIST1H1BP16401 226 aaKnown RBP5.64□□□□□ -1.51
PHGDH-225ENST00000641720 H2BFSP57053 126 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 POLR2GP62487 172 aaKnown RBP eCLIP5.64□□□□□ -1.51
PHGDH-225ENST00000641720 RUNX1Q01196 453 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 ATP5G2Q06055 141 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 PVRIGQ6DKI7 326 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 ZNF343Q6P1L6 599 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 Q8N1Y9 231 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 SLC24A4Q8NFF2 622 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 ZNF502Q8TBZ5 544 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 MISP3Q96FF7 219 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 OR4C12Q96R67 309 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 ENY2Q9NPA8 101 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 HEYLQ9NQ87 328 aaPredicted RBP5.64□□□□□ -1.51
PHGDH-225ENST00000641720 MRPL36Q9P0J6 103 aaKnown RBP5.64□□□□□ -1.51
PHGDH-225ENST00000641720 GSKIPQ9P0R6 139 aa5.64□□□□□ -1.51
PHGDH-225ENST00000641720 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 A0A0G2JLM5 398 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 C5orf51A6NDU8 294 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 C15orf62A8K5M9 175 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SEC14L6B5MCN3 397 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 PPP5D1E7EU14 171 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 F8W735 103 aaPredicted RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 BMPR1BO00238 502 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 WRBO00258 174 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SYNGR2O43760 224 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 MT-CO2P00403 227 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 MBPP02686 304 aaPredicted RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 NPY1RP25929 384 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SNCAP37840 140 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 HTR2BP41595 481 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 NKX2-1P43699 371 aaPredicted RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SLURP1P55000 103 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 ERHP84090 104 aaKnown RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 IL15RAQ13261 267 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 FCN2Q15485 313 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 SLC25A24Q6NUK1 477 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 OR1N2Q8NGR9 330 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 PINX1Q96BK5 328 aaKnown RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 ZNF414Q96IQ9 312 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 USMG5Q96IX5 58 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 C11orf1Q9H5F2 150 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 FNDC4Q9H6D8 234 aaPredicted RBP5.63□□□□□ -1.51
PHGDH-225ENST00000641720 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 MGAT4CQ9UBM8 478 aa5.63□□□□□ -1.51
PHGDH-225ENST00000641720 HERC1Q15751 4861 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 A8MZ25 164 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 K7EPK0 472 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 CXCL3P19876 107 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 GPR183P32249 361 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 PAX9P55771 341 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 S100A10P60903 97 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 ID3Q02535 119 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 ZNF616Q08AN1 781 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 C2orf83Q53S99 150 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 CLEC19AQ6UXS0 136 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 GSG1LQ6UXU4 331 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 OR11H1Q8NG94 326 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 OR11H7Q8NGC8 314 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 VN1R17PQ8TDU5 208 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 SCARB1Q8WTV0 552 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 EEF1AKMT3Q96AZ1 226 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 C2orf50Q96LR7 162 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 HIPK2Q9H2X6 1198 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 ZC4H2Q9NQZ6 224 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 CACFD1Q9UGQ2 172 aa5.62□□□□□ -1.51
PHGDH-225ENST00000641720 LRP1BQ9NZR2 4599 aa5.61□□□□□ -1.51
PHGDH-225ENST00000641720 OR2T8A6NH00 312 aa5.61□□□□□ -1.51
PHGDH-225ENST00000641720 PRSS46E5RG02 174 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms