RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 NDUFA3O95167 84 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 HES1Q14469 280 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 MMDQ15546 238 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 BSXQ3C1V8 233 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 C10orf55Q5SWW7 151 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 DYNAPQ8N1N2 210 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 NPBQ8NG41 125 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 LYPD6BQ8NI32 183 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
ERGIC3-220ENST00000640748 PLXNB1O43157 2135 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 E7EUB6 86 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 H3BUX3 64 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 SOX15O60248 233 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 HBE1P02100 147 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 MBP02144 154 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 BRS3P32247 399 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 FHITP49789 147 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 RAB2AP61019 212 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 EBI3Q14213 229 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 HNF4GQ14541 408 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 C11orf44Q8N8P7 122 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 NPCDR1Q9BY65 106 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
ERGIC3-220ENST00000640748 KRBOX1C9JBD0 128 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 OR13C7P0DN81 318 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 PAX6P26367 422 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 GNB1P62873 340 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 SSX3Q99909 188 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
ERGIC3-220ENST00000640748 A0A1B0GW64 132 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 TMEM11P17152 192 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 ZP3P21754 424 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 CD24P25063 80 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 GPX4P36969 197 aaPredicted RBP9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 AKR1C1Q04828 323 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 CD69Q07108 199 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 RAB31Q13636 194 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 LY6EQ16553 131 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 TEPPQ6URK8 271 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 Q8N6K4 173 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 KLHDC1Q8N7A1 406 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 PIFOQ8TCI5 191 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 SRSF12Q8WXF0 261 aaKnown RBP9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 P2RX4Q99571 388 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
ERGIC3-220ENST00000640748 IGLC7A0M8Q6 106 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 FCN1O00602 326 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 CNIH1O95406 144 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 OPRK1P41145 380 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 ACSM6Q6P461 480 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 ZNF114Q8NC26 417 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 BPIFCQ8NFQ6 507 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 SLC35E1Q96K37 410 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 PBDC1Q9BVG4 233 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 VSIRQ9H7M9 311 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 TREM1Q9NP99 234 aa9.35□□□□□ -0.91
ERGIC3-220ENST00000640748 NCBP2LA6PVI3 153 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 CORTO00230 105 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 AGPAT2O15120 278 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 REG1AP05451 166 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 M6PRP20645 277 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 PEA15Q15121 130 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 ETFRF1Q6IPR1 90 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 SLC16A13Q7RTY0 426 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 SFT2D1Q8WV19 159 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 MBD3L1Q8WWY6 194 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 NARS2Q96I59 477 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 LINC00052Q96N35 136 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 MGST2Q99735 147 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms