RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SCGB2A1O75556 95 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 OPRK1P41145 380 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 APOC4P55056 127 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 ODF3L2Q3SX64 289 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 TOMM20LQ6UXN7 152 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 CACNG5Q9UF02 275 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 TMEM56-RWDD3S4R434 201 aa18.75■□□□□ 0.59
VEGFA-232ENST00000640653 TMEM50AO95807 157 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 CD5P06127 495 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 HTR2BP41595 481 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 BSXQ3C1V8 233 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 IL22RA2Q969J5 263 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 GPR146Q96CH1 333 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 GALNT14Q96FL9 552 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
VEGFA-232ENST00000640653 PUS1Q9Y606 427 aaKnown RBP eCLIP18.74■□□□□ 0.59
VEGFA-232ENST00000640653 CMC4P56277 68 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-232ENST00000640653 HEYLQ9NQ87 328 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-232ENST00000640653 RPS10-NUDT3A0A1W2PQS6 291 aa18.72■□□□□ 0.59
VEGFA-232ENST00000640653 CCDC160A6NGH7 325 aa18.72■□□□□ 0.59
VEGFA-232ENST00000640653 CLN5O75503 358 aa18.72■□□□□ 0.59
VEGFA-232ENST00000640653 FAUP35544 74 aaKnown RBP18.72■□□□□ 0.59
VEGFA-232ENST00000640653 OR4X1Q8NH49 305 aa18.72■□□□□ 0.59
VEGFA-232ENST00000640653 OVOL2Q9BRP0 275 aa18.72■□□□□ 0.59
VEGFA-232ENST00000640653 FNDC4Q9H6D8 234 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-232ENST00000640653 CSMD3Q7Z407 3707 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 IGHV3OR16-13A0A075B7E8 117 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 IGHV3-74A0A0B4J1X5 117 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 CEBPZOSA8MTT3 80 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 PAFAH1B2P68402 229 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 TMEM187Q14656 261 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 TMEM230Q96A57 120 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 ZFAND3Q9H8U3 227 aa18.71■□□□□ 0.59
VEGFA-232ENST00000640653 STARD9Q9P2P6 4700 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 IGKV3-7A0A075B6H7 116 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 KIR2DL5BA0A0G2JN68 375 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 KIR2DL5BA0A0G2JPC4 375 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 UBE2CO00762 179 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 SULT1A3P0DMM9 295 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 SULT1A4P0DMN0 295 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 TFPI2P48307 235 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 AP3S2P59780 193 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 PYDC2Q56P42 97 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 FAM90A2PQ658T7 463 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 Q6ZWC4 215 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 TCF24Q7RTU0 167 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 KIR2DL5AQ8N109 375 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 KIR2DL5BQ8NHK3 375 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 TMEM231Q9H6L2 316 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 VSIRQ9H7M9 311 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 TP53TG1Q9Y2A0 90 aa18.7■□□□□ 0.58
VEGFA-232ENST00000640653 ANXA3P12429 323 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 AKR1C4P17516 323 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 C2orf83Q53S99 150 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 STPG3Q8N7X2 389 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 SLC24A4Q8NFF2 622 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 ST8SIA2Q92186 375 aa18.69■□□□□ 0.58
VEGFA-232ENST00000640653 MRPL36Q9P0J6 103 aaKnown RBP18.69■□□□□ 0.58
VEGFA-232ENST00000640653 DYNC2H1Q8NCM8 4307 aaKnown RBP18.69■□□□□ 0.58
VEGFA-232ENST00000640653 TRAV30A0A087WSZ9 112 aa18.68■□□□□ 0.58
VEGFA-232ENST00000640653 LCE6AA0A183 80 aa18.68■□□□□ 0.58
VEGFA-232ENST00000640653 A0A1B0GU03 582 aa18.68■□□□□ 0.58
VEGFA-232ENST00000640653 S100A5P33763 92 aa18.68■□□□□ 0.58
VEGFA-232ENST00000640653 MLANAQ16655 118 aa18.68■□□□□ 0.58
VEGFA-232ENST00000640653 RNASEH2CQ8TDP1 164 aaKnown RBP18.68■□□□□ 0.58
VEGFA-232ENST00000640653 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 RPL35AP18077 110 aaKnown RBP18.67■□□□□ 0.58
VEGFA-232ENST00000640653 NPPCP23582 126 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 SRPXP78539 464 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 KLF9Q13886 244 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-232ENST00000640653 NOXA1Q86UR1 476 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 APRG1Q8IVJ8 170 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 TOMM5Q8N4H5 51 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 GBGT1Q8N5D6 347 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 METTL26Q96S19 204 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 PRR13Q9NZ81 148 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
VEGFA-232ENST00000640653 PIGBOS1A0A0B4J2F0 54 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 A0A1W2PS18 150 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 SPRY2O43597 315 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 NXPH3O95157 252 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 APOHP02749 345 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-232ENST00000640653 SLC25A4P12235 298 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 CCR6P51684 374 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 SUPT4H1P63272 117 aaKnown RBP18.66■□□□□ 0.58
VEGFA-232ENST00000640653 NMSQ5H8A3 153 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 WFDC3Q8IUB2 231 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 LGI3Q8N145 548 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 TRIM63Q969Q1 353 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 LYSTQ99698 3801 aa18.66■□□□□ 0.58
VEGFA-232ENST00000640653 IGHV3-66A0A0C4DH42 116 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 DNASE2O00115 360 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-232ENST00000640653 NPY1RP25929 384 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 RPL11P62913 178 aaKnown RBP18.65■□□□□ 0.58
VEGFA-232ENST00000640653 SMCO1Q147U7 214 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 DEFB135Q30KP9 77 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 ETFRF1Q6IPR1 90 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 OR1S2Q8NGQ3 325 aa18.65■□□□□ 0.58
VEGFA-232ENST00000640653 NARS2Q96I59 477 aaKnown RBP18.65■□□□□ 0.58
VEGFA-232ENST00000640653 V9GYH0 126 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms